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SCNpilot_expt_1000_bf_scaffold_146_curated_14

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 17620..18102

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNZ1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 138.0
  • Bit_score: 109
  • Evalue 3.10e-21
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:EHR73199.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 138.0
  • Bit_score: 109
  • Evalue 4.40e-21
putative TRAP-type C4-dicarboxylate transport system, small permease component similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 161.0
  • Bit_score: 97
  • Evalue 3.90e-18

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Taxonomy

Burkholderiales bacterium JOSHI_001 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
GTGCCTGCTCCATGGTTGCGCTGGCTCGAGCGCCTCGCCGGAACGGCATTATTCGCGATGCTGGCCCTGACGACCGCCGACGTCGTCGGCCGCTATCTGTTCCGCCGGCCGCTGCCCGGGGTCATCGAGCTGGTCCAGTACGCGATGGTGCTCGTCGTCTTCGCGGCCCTGCCGGTGGTCACCTTCAGGGGCCAGCACATCTCGGTCGGCCTGCTCGACGGCAAGCTGCACGGACGCGTCCGAAGGCTGCAGCAGGTCCTGGTGGGCGCGACCTGTGCGGTGGTGCTGGCGGCGCTCGCCTGGACGCTGTACGACGTCGCCGGTTCGATGCGCGAGCAGGGCGACGTCATCGGCTATCTCAGGCTGCCGACCTTCCTGGCGGCCTACCTGATGTCGGCGATGTCGCTGGTGACGGCCGGCATCTGTCTGCTGGCCGCACTGCGGCCGCCCGCCGCTGCCGATCCCGGGCAGCCGGCGCATTGA
PROTEIN sequence
Length: 161
VPAPWLRWLERLAGTALFAMLALTTADVVGRYLFRRPLPGVIELVQYAMVLVVFAALPVVTFRGQHISVGLLDGKLHGRVRRLQQVLVGATCAVVLAALAWTLYDVAGSMREQGDVIGYLRLPTFLAAYLMSAMSLVTAGICLLAALRPPAAADPGQPAH*