ggKbase home page

SCNpilot_expt_1000_bf_scaffold_146_curated_30

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(35581..36492)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000373F4F7 similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 303.0
  • Bit_score: 429
  • Evalue 3.40e-117
LysR family transcriptional regulator {ECO:0000313|EMBL:EIJ48490.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 303.0
  • Bit_score: 423
  • Evalue 2.00e-115
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 302.0
  • Bit_score: 391
  • Evalue 3.20e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. GW103 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGCGCAGAAAGATCCCTTCCAACCTGGCGCTGGTGGCCTTCGAATCGGCCGCGCGCCACCAGAGCTTCACCAAGGCGGCCCGCGAGCTGTCGGTGACGCAGAGCGCGGTGTGCCGGCAGGTGGCCGGGCTGGAGGAATTCCTCGGGCTGGAGCTGTTCAGGCGCACCCGGCGCGGGGTGGTGCTCACCGAGGCAGGCACGAACTACGGCCGCCAGGTGGCGGCGCGCCTGGACGAGATCGAGCGCGACGCGCTCGCGGTGATGTCGAGCGGCGGGCGCGGCGGCATCCTGGAGCTGGCGGTCGTGCCCACCTTCGCCACGCGCTGGCTGCTGCCGCGACTCGGCGCCTTCACCGGCGCCCATGCCGACGTGGCGGTGAACCTCACGCCGCGCACGCGGCCGTTCCTGTTCGACGACACGCCCTTCGACGCCGCGATCTACGCCGGCGAATCGAACTGGCCCGGCACCGAGGGCGTGTTCCTGATGCGCGAGAACCTGGTGGCCGTGGGCAGCCCCAGGCTGATCGCGCCGCGCCGCCGGATCGCGGCGCGCGAGCTCGGCCGCCTGCGCCTGCTGCAGCAGAGCACGCGCCCCTACGCATGGCGGCTGTGGTTCGAATCGCTCGGCCTGCGCATCGACAACGACCTCGCCGGCCCGCGCATGGAGCTGTTCTCCATGCTCACCGAAGCGGCCATCCAGGGCATGGGCGCGGCCCTCATCCCGCGCTTCCTGATCGAGGACGAGCTGCGCCGCGGCCTGCTGCTCGAGCTGGTCGACCACCGCTACCTGAGCGACCGCTCGTACTACCTGATCTATCCCGAGCGCAAGGCCGAGAGCCCGCTGCTGCGCACCTTCCGCGCATGGCTGGAGGAAGAGGCCCGCGCCTACCGCACCGCCTCCGGGCTGGGCTGA
PROTEIN sequence
Length: 304
MRRKIPSNLALVAFESAARHQSFTKAARELSVTQSAVCRQVAGLEEFLGLELFRRTRRGVVLTEAGTNYGRQVAARLDEIERDALAVMSSGGRGGILELAVVPTFATRWLLPRLGAFTGAHADVAVNLTPRTRPFLFDDTPFDAAIYAGESNWPGTEGVFLMRENLVAVGSPRLIAPRRRIAARELGRLRLLQQSTRPYAWRLWFESLGLRIDNDLAGPRMELFSMLTEAAIQGMGAALIPRFLIEDELRRGLLLELVDHRYLSDRSYYLIYPERKAESPLLRTFRAWLEEEARAYRTASGLG*