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SCNpilot_expt_1000_bf_scaffold_284_curated_6

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6397..7566

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI0003679C1D similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 391.0
  • Bit_score: 590
  • Evalue 1.50e-165
Variovorax paradoxus strain MEDvA23 contig_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28459.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 388.0
  • Bit_score: 590
  • Evalue 2.10e-165
putative high-affinity branched-chain amino acid ABC transporter, branch-chain amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 391.0
  • Bit_score: 586
  • Evalue 6.60e-165

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAAGAAAAGACAGGCACTGGGAGTGGCGGTGGCAGCCGCGATGCTGGCCGTGGCAGGCACCGCCGCGGCGCAGACGGGCAAGCCGTACAAGGTCGGCTTCATGCTGCCCTATACGGGCACGTACGCCGCGCTCGGCAACGCCATCGAGAACGGCTTCAAGCTGTACGTCGAGGAGCAGGGCGGCAAGCTCGGCGGCGATCCGATCGAGTACGTGCGGGTGGACGACGAGAGCGACCCGGCCAAGGCCACCGACAACATCAACAAGCTCATCAAGCGCGACCAGGTCGACGTGGTGGTGGGCACCGTGCACTCCGGCGTGGCGATGGCGATGGCCAAGGTCGCCAAGGACAGCGGCGTGCTGATGATCGACCCCAACGCCGGCGCCGACGCGGTCACCGGCCCGATGTGCGCGCCCAACATCTTCCGCAGCTCGTTCTCGAACTGGCAGCCGGCCTACGCCATGGGCGTCGAGGCGGCCAAGCGCGGCTACAAGAACGCCGTCACCATCACCTGGAAGTACGCCGCGGGCGAAGAGAGCGCGAACGGCTTCAAGGAGGCCTTCACCAAGGGCGGCGGCAAGGTGATCAAGGATCTCACCCTGCCGTTCCCCAACGTCGAGTTCCAGGCGCTGCTCACCGAGATCGCCTCGCTCAAGCCCGACGTGGTGTACACCTTCTTCGCCGGCGGCGGCGCGGTCAAGTTCGTCAAGGACTACGCGGCGGCCGGGCTCAACAAGTCGATCCCGCTCGTGGGCGCCGGCTTCCTCACCGACGGCACGCTCGATGCGCAGGGCGAGGCGGCACAGGGGCTGCTCACCACGCTGCACTACGCCGACGGCCTGACCAACGCGAAGGACAAGGCCTTCCGCCTGGCCTACGCGAAGGCGTACAAGCTGCAGCCCGACGTCTACGCCATGCAGGGCTACGACGCGGCGCAGATCCTCGGCGCCGGCCTGGCTGCGGTCAAGGGCGACAAGTCCAAGAAGGAGGCGATGATCGCCGCGATGGAGAAGGCGCGCATCGACAGCCCGCGCGGCCCGTTCACCCTGTCCAAGGCGCACAACCCGGTGCAGGACATCTACCTGCGCAAGGTGGTCGGCAAGGAGAACGTGGTGCAGGGCGTGGCGGTCAAGGCGCTGGCCGATCCTGCGCGCGGCTGCCGCATGTAA
PROTEIN sequence
Length: 390
MKKRQALGVAVAAAMLAVAGTAAAQTGKPYKVGFMLPYTGTYAALGNAIENGFKLYVEEQGGKLGGDPIEYVRVDDESDPAKATDNINKLIKRDQVDVVVGTVHSGVAMAMAKVAKDSGVLMIDPNAGADAVTGPMCAPNIFRSSFSNWQPAYAMGVEAAKRGYKNAVTITWKYAAGEESANGFKEAFTKGGGKVIKDLTLPFPNVEFQALLTEIASLKPDVVYTFFAGGGAVKFVKDYAAAGLNKSIPLVGAGFLTDGTLDAQGEAAQGLLTTLHYADGLTNAKDKAFRLAYAKAYKLQPDVYAMQGYDAAQILGAGLAAVKGDKSKKEAMIAAMEKARIDSPRGPFTLSKAHNPVQDIYLRKVVGKENVVQGVAVKALADPARGCRM*