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SCNpilot_expt_1000_bf_scaffold_284_curated_47

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 51239..52687

Top 3 Functional Annotations

Value Algorithm Source
lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein (EC:1.8.1.4) similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 485.0
  • Bit_score: 693
  • Evalue 3.70e-197
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 479.0
  • Bit_score: 693
  • Evalue 1.60e-196
dihydrolipoamide dehydrogenase n=1 Tax=Ralstonia solanacearum RepID=UPI0002DF7ADA similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 485.0
  • Bit_score: 695
  • Evalue 5.20e-197

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
ATGGCCCAGACCTACGATGTCGTCGTGATCGGCGCCGGCCCCGGCGGCTACATCGCGGCGATCCGCGCCGCCCAGCTCGGCTTCAAGGTCGCCTGCGTCGAGAAGTGGCGCAACCCGCAGGGCGAGCTCGCCCTGGGCGGCACCTGCCTGAACGTCGGCTGCATACCCTCCAAGGCGCTGCTCGCCTCCAGCGATGCGTTCGAGAGCGTCCGGCACATGCTCGATGCGCACGGCATCGCGGTCGACGAGCCGCGGCTCGACCTGGCCAAGATGCTCGCGCGCAAGGACGCCATCGTGCGCAAGATGACCAAGGGCATCGAGTTCCTGTTCCGCAAGAACAAGATCGCCTGGCTGCAGGGGCACGGCCGCTTCGTGGGCGCCGAGGACGGCGCCTACCGGCTCGAGATCGACGACGATGCCTCGGACGCGGGCAAGGCGCCCCAGCTGGTGGATGCCAAGCACGTGGTCATCGCGACCGGCTCCAAGGCCCGCCACCTGCCGGGCATCCCGGTCGACAACCAGCTGATCTGCGACAACGAGGGTGCGCTCTCGCTGCCCGAGGTGCCGCGGCGGCTGGGCGTGATCGGGGCCGGCGTGATCGGGCTCGAGCTGGGCTCGGTATGGCGCCGCCTGGGTTCGCAGGTCACCCTGCTCGAGGCGCTGCCGGACTTCCTCGCCGCGGCCGACGCGGGCGTGCAGAAGGAAGCCTGGAAGCTGCTCACCCGCCAGGGCCTGAAGATCGAGCTCGGCGTGAAGATCGCCTCGGCCGAGGCCGGCAAGAAGGGCGTGAAGGTCGCCTATGCCGATGCCAAGGGCGCCGCGCACGTGCTCGAGGTCGACCGCCTGATCGTGTCGGTGGGCCGGGTGCCCAACACCGACGGGCTCGGGCTCGACGCGGTCGGGCTGGCGGCCGACGCGCGCGGCTTCGTGCCGGTCGACGCGCAGTGCCGCACCGCGGTGCCCAACGTCTGGGCCATCGGCGACGTGGTGCGCGGGCCGATGCTCGCGCACAAGGCCGAGGAGGAGGGCGTGATGGTGGCCGAGCTCATCGCCGGCCAGAAGCCGCACATCGACTACAACTGCATTCCCGCGGTCATCTACACCTCGCCGGAGATCGCCTGGGTCGGGCGCACCGAGCAGCAGCTCGAGGCCGAGGGGCGCGCCTACAAGAGCGGCCAGTTCCCGTTCGCCGCCAACGGTCGCGCGCTGGGCATGGGCGCGGCGGACGGTTTCGTCAAGGTGCTCGCCGATGCGGCCACCGACGAGGTGCTCGGCGTGCACATCGTGGCGGCCACCGCCTCCGACCTGATCGCCGAAGCGGTGATGGCGATGGAGTTCAGGGCTTCGGCCGAGGACATCGGACGCATCTGCCACGCGCATCCGTCGATGTCGGAGGCCGTGCGCGAAGCGGCGCTGGCGGCCACCGACAAGCGCGCCCTGAATATCTAG
PROTEIN sequence
Length: 483
MAQTYDVVVIGAGPGGYIAAIRAAQLGFKVACVEKWRNPQGELALGGTCLNVGCIPSKALLASSDAFESVRHMLDAHGIAVDEPRLDLAKMLARKDAIVRKMTKGIEFLFRKNKIAWLQGHGRFVGAEDGAYRLEIDDDASDAGKAPQLVDAKHVVIATGSKARHLPGIPVDNQLICDNEGALSLPEVPRRLGVIGAGVIGLELGSVWRRLGSQVTLLEALPDFLAAADAGVQKEAWKLLTRQGLKIELGVKIASAEAGKKGVKVAYADAKGAAHVLEVDRLIVSVGRVPNTDGLGLDAVGLAADARGFVPVDAQCRTAVPNVWAIGDVVRGPMLAHKAEEEGVMVAELIAGQKPHIDYNCIPAVIYTSPEIAWVGRTEQQLEAEGRAYKSGQFPFAANGRALGMGAADGFVKVLADAATDEVLGVHIVAATASDLIAEAVMAMEFRASAEDIGRICHAHPSMSEAVREAALAATDKRALNI*