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SCNpilot_expt_1000_bf_scaffold_284_curated_61

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(66383..70099)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 999.99
  • Bit_score: 1505
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 999.99
  • Bit_score: 1396
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RW99_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 999.99
  • Bit_score: 1505
  • Evalue 0.0

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Taxonomy

Lautropia mirabilis → Lautropia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3717
TTGCGCGTCTTCCGCACCGAAGTGCCCTCCCTGCATCCGCTCGCCCCGCCCGCCACGCCTTCCGGCTCCCGCATCGAACCGCCCGCGCCGGTCGCGGCACGCCAGACGCGCCCGCCGGCCGCCGGTGCGCCCGTGCTCGACGCGCTGGTCGTGGCGCACCCTGCGCCGGCGCCCGGACAGGTGCGCACCCTGCCCGGCTGCCGCGGCTCGGGCGACGCCCTGCTGCTGGCGGCGCTCGCGCAGCGCGAGGCGGGCGCCGGGCGCATGCTGGCGGTCGTGGCGGCGGGCGCCCCCGACGCCCAGCGGCTCTCCGAGGAGATCCGCTGGTTCGTGCCCGGCCTGCGCGTGCTGCTGCTCCCGGACTGGGAGACCCTGCCCTACGACGCATTCTCGCCGCACCAGGACCTGATCTCGGCGCGCCTGGCGACCCTGTATGCCTTGCAGCGCGGCGAATGCGACGTGCTGGTGGCGCCCGCCACCACCGCGCTGCACCGCCTGGCGCCGCCGGCCTTCCTCGCCTCGCACACCTTCTTCTTCCACAAGGGACAGCGCCTGGACGAAGCGCGGCTGCGCAGCCAGCTCGTGCTGGCCGGCTACGAGCACGTCTCGCAGGTGGTGCGTCCGGGCGAGTACTGCGTGCGCGGCGGGCTGATCGACCTCTATCCGATGGGTGCGGCGCTGCCCTACCGGCTCGACCTGTTCGGCGACGAGGTCGAATCGATCCGCACCTTCGATCCCGACAACCAGCGCAGCCTGTTCCCCATCGAGCGCGTGCGCCTGCTGCCCGGCCGCGAGTTCCCCGTGGACGAGGCCGCGCGCACCGCGTTCCGCGGCCGCTGGCGCGAGCGCTTCGACGGCGATCCGTCGCGCAGCCCCGTCTACCGCGACGTCGGCAACGGCATCATGCCGGCCGGCATCGAGTACTGGCTGCCGCTGTTCCACGAGGCCACCGCCACCCTGTTCGACTACCTGCCGCAAGGGGCCATCGTGGTCTCGCACGGCGAGGTCGAGCCGGCCGCGCAGCGCTTCGCCCAGGAGACCGCGCAGCGCCATCGCTTCCTCGCCCACGATCCCGAGCGCCCGCTGCTGCGACCCGACGAGCTGTTCATCGACGCCGCCCGCTTCTTCACCGAGGCGCGCCGCTTCGGACGCTGGGCGATCGGGCGCGCGGACGCGGGCGGCCAGGACGCCGCCGCCGGCGGCGGCGCCACTGCCGATGCGGCCATCGACGTCCGCACCGGCACCCGAACCGATGCCGCTGCCGATGGCCTCGCCAGCGCCGCTGCTGCCGCTACTGCCGCCGAAACCCGCGCCGACGCCTTCGCGCTCACCCTCCCCGACGTCTCGGTCGATCGCCGCGCCGAGCATCCCGTCACGCGGCTGGCGGCCTTCGTGGCCGGCTCGCCGGTGCGCAAGCTGGTGCTGGCCGAGTCCGCCGGCCGGCGCGAGACCCTCGCGCAGCTGTTCGGCGAGCACGGCCTGGCGCTGCCCCAGGTCGACGACTGGAACGCCTTCCTGGCCGGCGACGAGGCCGCGGCGCTGGCCGTCGGCCCGCTGCAGGGCGGCTTCGTCGTACCCGGCGCGCAGATCGCCGTCATCACCGAGGCGGAGCTGTTCGTCGGCGCGGTGCGGCGCACGCGGCGCGGGCGGCGCGATGCGCAGACCGACGTCGACGCCATCATCCGCGATCTCTCCGAGCTCAAGATCGGCGACCCGGTGGTGCACGCGCAGCACGGCATCGGCCGCTACGAGGGGCTGGCGACGATGGACCTCGGCGACGGTCCGACCGAGTTCCTGCACCTCACCTACGCCAACCAGGCCACGCTGTACGTGCCGGTCTCGCAGCTGCACGTGATCGGCCGCTACAGCGGCGCGAACCCCGAGGAAGCGCCGCTGCACCAGCTCGGCTCCGGGCAGTGGGAGCGCGCGCGCCGGCGTGCCGCGCGCCATGCGCGCGACGCCGCCGCCGAGCTGCTCGACCTGTACGCGCGCCGCGCCGCGCGCACCGGCCATCGCTTCGGCTTCGACGCCCAGAGCTACGCCGCCTTCGCCGAGGGCTTCCCCTTCGAGGAGACGCCCGACCAGCTCGCGGCGGTGCATGCGGTGATCCAGGACATGGTCTCGGGCAAGCCCATGGACCGGCTGGTGTGCGGCGACGTCGGCTTCGGCAAGACCGAGGTGGCGCTGCGCGCGGCCTGGGTCGCCGTGGCCGACGGCAAGCAGGTGGCCATCCTCACCCCCACCACCCTGCTGGCCGAGCAGCACTTCCAGACCTTCTCCGACCGCTTCGCCGAGCTGCCGGTGAAGCTGGTCGAGCTGTCGCGCTTCCGCTCGGCGAAGGAGACCAAGGCGGCCATCGCCGGGCTCGCCGCCGGCACGGTCGACATCGCGATCGGCACGCACAAGCTGCTGTCGTCCGAAGTGAAGTTCGCGCGCCTCGGGCTGGTCATCATCGACGAAGAGCACCGCTTCGGCGTGCGCCAGAAGGAGGCGCTCAAGGCGCTGCGCGCCGAGATCGACGTGCTCACGCTCACCGCCACGCCGATCCCGCGCACGCTCGCCATGAGCCTAGAGGGCATCCGCGATTTCTCGGTCATCGCCACCGCGCCGCAGAAGCGCCTGGCGATCAAGACCTTCGTGCGGCGCGAGGGCGACGCCGTCATCCGCGAGGCGCTGCTGCGCGAGCTCAAGCGCGGCGGCCAGGCCTACTTCCTGCACAACGAGGTCGAGACCATCGAGAACCGCCGCACGCGGCTCGCCGAGCTGGTGCCCGAGGCGCGCATCGCGATCGCCCACGGCCAGATGCCCGAGCGCGAGCTCGAGCGCGTGATGCGCGACTTCCACCAGCAGCGCTTCAACGTGCTGCTGTGCACGACGATCATCGAGACCGGCATCGACGTGCCCAGCGCCAACACCATCGTGATCCACCGCGCCGACCGTTTCGGGCTGGCGCAGCTGCACCAGCTGCGCGGCCGCGTCGGGCGCTCCCATCACCAGGCCTACGCCTACCTGCTCACGCCCGACGAGTCGGCGATGACGCGCGACGCCGGCAAGCGGCTCGAGGCGATCCAGGCCATGGAGGAGCTCGGCGCCGGCTTCTACCTGGCGATGCACGACCTGGAGATCCGCGGCGCCGGCGAGGTGCTCGGCGAGTCCCAGTCGGGCGACATGCAGGAGGTCGGCTTCGCGCTGTACACCGAGATGCTCGAGGAAGCCGTGAGCGCCCTGAAGGCCGGACGCGAGCCCGACCCCTCGGCGCCGCTGGCCGCCACCACCGAGATCAACCTGCACGTGCCGGCGCTGCTGCCGGCCGACTACTGCGGCGACGTGCACGAGCGGCTCGTCCTGTACAAGCGCATGGCCGACTGCGCGCAGCCCGATGCGCTCGAGGCGCTGCGCGAGGAGCTGGTCGACCGCTTCGGCAAGCTCCCGGAGGCGGCGCGCGCGCTGTTCGACACCCACCGGCTGCGCATCGCCTCGGCGCCGCTCGGCATCGTGCGCATCGACGCCTCCGGCGAATCCATCGTGATGCAGTTCAAGCCCGATCCCCCGATCGACGCGGCGCACATCATCCGTTTCATCCAGAGCCGGCGTGACGCCAAGCTCTCGGGCCAGGACCGCCTGCGCTTCGCCGTCGCCACGCCCGATGCCGCCGCCCGGGTGCAGCGCATCCGCGAGATCCTGCAGGGCCTGGCAGGCAAGGCGGCGACGCGATGA
PROTEIN sequence
Length: 1239
LRVFRTEVPSLHPLAPPATPSGSRIEPPAPVAARQTRPPAAGAPVLDALVVAHPAPAPGQVRTLPGCRGSGDALLLAALAQREAGAGRMLAVVAAGAPDAQRLSEEIRWFVPGLRVLLLPDWETLPYDAFSPHQDLISARLATLYALQRGECDVLVAPATTALHRLAPPAFLASHTFFFHKGQRLDEARLRSQLVLAGYEHVSQVVRPGEYCVRGGLIDLYPMGAALPYRLDLFGDEVESIRTFDPDNQRSLFPIERVRLLPGREFPVDEAARTAFRGRWRERFDGDPSRSPVYRDVGNGIMPAGIEYWLPLFHEATATLFDYLPQGAIVVSHGEVEPAAQRFAQETAQRHRFLAHDPERPLLRPDELFIDAARFFTEARRFGRWAIGRADAGGQDAAAGGGATADAAIDVRTGTRTDAAADGLASAAAAATAAETRADAFALTLPDVSVDRRAEHPVTRLAAFVAGSPVRKLVLAESAGRRETLAQLFGEHGLALPQVDDWNAFLAGDEAAALAVGPLQGGFVVPGAQIAVITEAELFVGAVRRTRRGRRDAQTDVDAIIRDLSELKIGDPVVHAQHGIGRYEGLATMDLGDGPTEFLHLTYANQATLYVPVSQLHVIGRYSGANPEEAPLHQLGSGQWERARRRAARHARDAAAELLDLYARRAARTGHRFGFDAQSYAAFAEGFPFEETPDQLAAVHAVIQDMVSGKPMDRLVCGDVGFGKTEVALRAAWVAVADGKQVAILTPTTLLAEQHFQTFSDRFAELPVKLVELSRFRSAKETKAAIAGLAAGTVDIAIGTHKLLSSEVKFARLGLVIIDEEHRFGVRQKEALKALRAEIDVLTLTATPIPRTLAMSLEGIRDFSVIATAPQKRLAIKTFVRREGDAVIREALLRELKRGGQAYFLHNEVETIENRRTRLAELVPEARIAIAHGQMPERELERVMRDFHQQRFNVLLCTTIIETGIDVPSANTIVIHRADRFGLAQLHQLRGRVGRSHHQAYAYLLTPDESAMTRDAGKRLEAIQAMEELGAGFYLAMHDLEIRGAGEVLGESQSGDMQEVGFALYTEMLEEAVSALKAGREPDPSAPLAATTEINLHVPALLPADYCGDVHERLVLYKRMADCAQPDALEALREELVDRFGKLPEAARALFDTHRLRIASAPLGIVRIDASGESIVMQFKPDPPIDAAHIIRFIQSRRDAKLSGQDRLRFAVATPDAAARVQRIREILQGLAGKAATR*