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SCNpilot_expt_1000_bf_scaffold_579_curated_1

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3..683

Top 3 Functional Annotations

Value Algorithm Source
nitrous-oxide reductase (EC:1.7.2.4); K00376 nitrous-oxide reductase [EC:1.7.2.4] similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 218.0
  • Bit_score: 408
  • Evalue 1.90e-111
Nitrous-oxide reductase {ECO:0000313|EMBL:ACB33751.1}; EC=1.7.2.4 {ECO:0000313|EMBL:ACB33751.1};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 218.0
  • Bit_score: 408
  • Evalue 8.40e-111
Nitrous-oxide reductase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y809_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 218.0
  • Bit_score: 408
  • Evalue 6.00e-111

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Notes

split gene, connects with SCNpilot_expt_1000_bf_scaffold_357_curated_1 Rose Kantor (11/24/15)

Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTTCCACGGCGGCGACAAGAGCGCAAGTTCCACGGCGGCGACAAGAGCGCCAAGTACGTGGTCGACCGGCTCGACGTCCACTTCCAGCCGGGGCACATCAACGCCTCGCAGTCGGAGACGGTGAAGGCCGACGGCAAATGGCTCGCCGTCGGCTGCAAGTTCTCCAAGGACCGCTTCCTGCCGGTCGGGCCGCTTCATCCGGAGAACGAGCAACTGATCGACATTTCCGGCGACAAGATGGTGCTGGTGGCCGACCACTCGGTGCGCGGCGAGCCGCACGACTTCATCATCTTCAAGCGCGAGCTGCTGCGGCCCAAGCAGGTCTACGATCTCGCCGACTTCCCCAACGCCGTGAAGGACGCCACCGAGGCCGGCGTGTTCCGCGACGGCAGGAAGGTGCACGTGAAGATCTCGTCGCAGGCGCCCAGCTTCAGCCTCTCCGAGTTCAAGGTGAAGAAGGGCGACGAGGTCACGCTGACGCTGACCAACCTGGACAAGATCGAGGACCTGACGCACGGCTTCGCGATCCCGAAGTACAACATCAACTTCATCGTCAACCCCCAGGAGACCAAGTCGGTCACCTTCATCGCCGACCAGCCGGGCGTGTTCTGGTGCTACTGCACGCACTTCTGCCACGCGCTGCACCTCGAAATGCGTTCGCGCCTGATCGTCGAAGCCTGA
PROTEIN sequence
Length: 227
VPRRRQERKFHGGDKSAKYVVDRLDVHFQPGHINASQSETVKADGKWLAVGCKFSKDRFLPVGPLHPENEQLIDISGDKMVLVADHSVRGEPHDFIIFKRELLRPKQVYDLADFPNAVKDATEAGVFRDGRKVHVKISSQAPSFSLSEFKVKKGDEVTLTLTNLDKIEDLTHGFAIPKYNINFIVNPQETKSVTFIADQPGVFWCYCTHFCHALHLEMRSRLIVEA*