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SCNpilot_expt_1000_bf_scaffold_1270_curated_9

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3808..4665

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=2 Tax=Variovorax paradoxus RepID=C5CP47_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 314.0
  • Bit_score: 399
  • Evalue 2.10e-108
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 296.0
  • Bit_score: 410
  • Evalue 2.10e-111
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 314.0
  • Bit_score: 399
  • Evalue 6.50e-109

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Taxonomy

Burkholderiales bacterium GJ-E10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGGGACAGAAGATTCATCCGACCGGTTTCCGCCTGGCCGTCACCAGGAACTGGTCGTCGCGCTGGTTCGCCACCGGCGAGCAGTACGCCAAGACGCTCAACGATGACATCAAGGTGCGCGAGTACCTGCGGCGTAAGCTGCGCAGCGCCTCGGTGAGCCGCGTGCTGATCGAGCGTCCGGCAAAGAACGCGCGCATCACCATCTTCTCGGCACGCCCGGGGGTGGTGATCGGCAAGAAGGGCGAGGACATCGAGCTGCTCAAGGTTGACCTGCAGCGGCTGATGGGCGTGCCGGTGCACGTGAACATCGAGGAGATCCGCAAGCCCGAGACCGACGCCCAGCTGATCGCCGACTCGATCACCCAGCAGCTGGAGAAGCGCATCATGTTCCGCCGCGCCATGAAGCGCGCCATGCAGAACGCGATGCGGCTCGGCGCGCAGGGCATCAAGATCATGAGCTCGGGTCGCCTGAACGGCATCGAGATCGCCCGGCGCGAGTGGTATCGCGAGGGCCGCGTGCCGCTGCACACGCTGCGCGCCGACATCGACTACGGCGTCTCGCAGGCCCTGACCACCTACGGCACCATCGGCGTGAAGGTCTGGGTCTACAAGGGCGACACGCTGGGCCGCAACGACGCGCCGCTGGGCGCCGACAAGGAGGCGCTGGCCACGCCCGAGAAGGACGATCGCCGCACCCGGCGCGCACCCGGGCGTCCGGGCGCGCGCGGGCCGCGCCGCCGCCCCGAGGGCGAGGCCGCGGAAAGGCCCGCCGAGCAGGCGGCCGAGGCACCGAAGGCCACCGTCAAGCGCGTTCGCAAGGTGGCGGCCGCGGGCGAAGGCGGCAAGACCAAGGAGTGA
PROTEIN sequence
Length: 286
MGQKIHPTGFRLAVTRNWSSRWFATGEQYAKTLNDDIKVREYLRRKLRSASVSRVLIERPAKNARITIFSARPGVVIGKKGEDIELLKVDLQRLMGVPVHVNIEEIRKPETDAQLIADSITQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARREWYREGRVPLHTLRADIDYGVSQALTTYGTIGVKVWVYKGDTLGRNDAPLGADKEALATPEKDDRRTRRAPGRPGARGPRRRPEGEAAERPAEQAAEAPKATVKRVRKVAAAGEGGKTKE*