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SCNpilot_expt_1000_bf_scaffold_1270_curated_28

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 12774..13397

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Burkholderia sp. SJ98 RepID=K8RQH3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 207.0
  • Bit_score: 346
  • Evalue 2.00e-92
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 207.0
  • Bit_score: 347
  • Evalue 1.20e-92
rpsD; 30S ribosomal subunit protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 207.0
  • Bit_score: 345
  • Evalue 1.10e-92

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Taxonomy

Ralstonia mannitolilytica → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGGCACGTTATACCGGACCGAAAGCGAAACTGTCCCGCCGGGAAGGGACCGACCTGTTCCTCAAGAGCGCCCGCCGCGGCCTCGACTCCAAGTGCAAGCTCGACAGCAAGCCCGGCCAGCACGGGCGCACCTCGGGCGCGCGTCCCTCCGACTACGGCCTGCAGCTGCGCGAGAAGCAGAAGGTCAAGCGCATGTACGGCGTGCTGGAGCGCCAGTTCCGCCGCTATTTCGCGGAGGCCGAGCGCCGTCGCGGCAACACCGGCGAGAACCTGCTGCAGCTGCTCGAGAGCCGGCTCGACAACGTGGTGTACCGCATGGGCTTCGGGTCGACGCGCGCCGAGGCGCGCCAGCTGGTCGGCCACAAGGCGGTCACGGTCAACGGCCAGGCGGTCAGCATTCCCTCGCTGCTGGTGCGCCCGAACGACGTGATCGCCGTGCGCGAGAAGTCGCGCAAGCAGGCCCGTGTGCAGGATGCGCTGAACCTGGCCGAGCAGAGCGGCTTTCCGTCCTGGGTGTCGGTCGACAAGAACAAGATGGAGGGCGTGTTCAAGAGCATGCCCGACCGCAGCGATCTTGCCGGCGACATCAACGAAAGCCTGATCGTCGAGTTGTACTCGCGCTAA
PROTEIN sequence
Length: 208
VARYTGPKAKLSRREGTDLFLKSARRGLDSKCKLDSKPGQHGRTSGARPSDYGLQLREKQKVKRMYGVLERQFRRYFAEAERRRGNTGENLLQLLESRLDNVVYRMGFGSTRAEARQLVGHKAVTVNGQAVSIPSLLVRPNDVIAVREKSRKQARVQDALNLAEQSGFPSWVSVDKNKMEGVFKSMPDRSDLAGDINESLIVELYSR*