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SCNpilot_expt_1000_bf_scaffold_357_curated_13

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 15853..16233

Top 3 Functional Annotations

Value Algorithm Source
Possible Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIX5_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 106.0
  • Bit_score: 123
  • Evalue 1.60e-25
30S ribosomal protein S30P / sigma 54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 106.0
  • Bit_score: 123
  • Evalue 5.20e-26
Tax=RBG_16_Gallionellales_56_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 121.0
  • Bit_score: 130
  • Evalue 1.40e-27

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Taxonomy

RBG_16_Gallionellales_56_9_curated → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGCGCACACCGCTGCAGATCAATTTCCGCGGGATGGAAACATCACCAGCCCTGGAAACACTGATACGTGACAAGGCAATCAAGCTCGAACAGTTTCACCCCAACGTGACTGCATGCCGGGTCGTGGTCGACAAGCCCCATCAGCACAAGCAGCAGGGCAAGCACTTCATCGTTTCGATCGATCTCACGGTACCGGGCAGCAACATCGTTGCCAACCACGCGCACCATGAAGACGTCAACGTGGCGCTGCGCGACGCCTTCTTCGCCGCCCGGCGCCAGCTCGAAGAGCACGCGATGCGCATGCGCGGCGACGGCAAGCGGCGCCTCGAAGGTGCCGGCGAAGCGTCGCTCGAGGCCGGATCCCAAATCCCCGCCGACTAG
PROTEIN sequence
Length: 127
MRTPLQINFRGMETSPALETLIRDKAIKLEQFHPNVTACRVVVDKPHQHKQQGKHFIVSIDLTVPGSNIVANHAHHEDVNVALRDAFFAARRQLEEHAMRMRGDGKRRLEGAGEASLEAGSQIPAD*