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SCNpilot_expt_1000_bf_scaffold_374_curated_14

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 15251..17638

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Burkholderia kururiensis RepID=UPI0003495C6B similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 795.0
  • Bit_score: 1382
  • Evalue 0.0
RND efflux transporter; K07003 similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 780.0
  • Bit_score: 1323
  • Evalue 0.0
RND efflux transporter {ECO:0000313|EMBL:ADX45635.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 780.0
  • Bit_score: 1323
  • Evalue 0.0

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2388
GTGCCTGCATCCTCCGACAACGGGTCGGCCCTGCTGCGCGCCGTCCACCGCTTCGAGACGTTCGCCTTCTCCAACCGGAGGGCCGTGCTCGCCGTCATGGCCGTCTTCACGCTGGCCATGGGGTACTTCGCGATCCAGCTGCGCATGGATGCCGGCTTCGACAAGCAGATGCCCGTCGGCCACGAATACATCCAGACCTTCCAGACCTATCGCGAGGACGTGCTCGGCGCCAACCGGCTCAACATCGTCGTCAAGGCCCGCCGGGGCAGCATCTGGAACGCGGCGGCGCTCGAGCGCCTCTACGACGTCACCCAGGCCGTCACCTTCCTGCCCAACATCGAGCGGCTCGGGGTGCAGTCGCTGTGGACGCCCAACAGCTTCGTCAACGAGATCACCGAGGAGGGGTTTCGCGCCGACCCGCTGATCGACGCCACCATCACGCCCGGGCAGCTCACCGACGAAACCGTCGCCGACATCCGGCGCGCTGCCGCGCAGGGCGGCTTCGTCGGCACGCTGGTCTCGCGCGACGAAACCGCTGCGATGATCACCGCCGAGCTGATCGAGTACGACGCCCAAGGCGCCAAGCTCGACTACATCGACTACAACCACCTCCTCGAGGAACGCATCCGCTCGAAGTTCGAGGACGCCGACTTCGAGATCCAGATCATCGGCTTCGCCAAGCAGATCGGCGACATCGCCGACGGCGCGCAGTCGGTCCTGAAGTTCTGCGCGATCGCCCTGCTGCTCACCGCCGCCGCGGTGTACTGGTACTGCCGCTCGCTGCGCTTCACCCTGCTGGCGATCGCCTGCTCGCTGACCTCGCTGGTGTGGCAGTTCGGCACGCTGCGCCTGCTCGGCTTCGGGCTGGATCCGCTGGCCGTGCTGGTGCCCTTCCTGGTGTTCGCGATCGGCGTCTCGCACGGCGTGCAGCAGATCAACTACATCGTGCGGCGGATCTCCTACGGGCAGTCCAACTTCGACGCCTGCCGCGACAGCTTCACCGGCCTGCTGATCCCGGGGACGCTGGCGCTCGTGACGGCCTTCGTCTCCTTCGTCACCCTGCTGCTGATCCCGATCCCCATGGTCCGCGAGCTCGCCATCGCGGCCTCGCTCGGCGTGGCCTACAAGATCGTCACCAACCTGGTGATGCTGCCCGTGGCCGCCTCCTTCTTCGACGTGAGCAAGGACTACGCCGACCAGGCGGTGGTCCAGCGCGAGCGGCGCTCCGGCTGGCTGCGCGTGCTGGCCAAGGTCGCCGAGCCGCGCAATGCGCTGCTCATGCTGGCCGTGACCGCGACCGTCTTCGCGGCCGCCGCCTGGCAGAGCCGCGACCGCGTGGTCGGCACCCTGCAGCCCGGGGCGCCCGAGCTGCGCGAGGACGCACGCTTCAACCGCGACGCCGTGGCCATCTCGAGCAACTTCGACACCGGGCTCGATTGGCTGACCGTGATCTTCGAGGCTCCGCCCGACAGCTGCGAGAACGTCAACATCGGCCTCTACCAGGACCGCTTCACCTGGGCCATGCACCCCGTCGAAGGCGTGCTCTCGGTGGCGTCCTATTCCGGCCAGCTGCGGCTCTACAACGAGGGCTACAACGAGGGCAACCCCAAGATGAGCGTGGTGCCGATCGACCCCGGCAACTACGCCGCGCTGTCGACCGAGATCGCCCGCATCCGCGGCACGATGCGCAAGGACTGCAGCATGACCGCGGTCAACCTCTTCCTCACCGACCACAAGGCGACGACGATCCAGCGGGTGATCGATGCCGTCAAGGAGTTCCGCGGCAGGAACACGCTGCCCGGCGTGAGCATCCGGCTGGCCTCGGGCAATGCCGGCGTGCTCGCGGCGATCGACGACGAGGTGGAGAAGAGCGAGCTGCCGATGATGCTGTACGTCTACGCGGCGATCGTGGTCCTGGTGTTCCTGGTCTACCGCGACCTGCGCGCCGTGATCGCCTGCTGCCTGCCGCTGACGGTGGGCACATTCGTCGGCTACTGGTTCATGAAGGAGCTGCAGATCGGCCTCACGGTGGCGACGCTGCCGGTGATGGTGCTGGCGGTGGGCATCGGGGTGGACTATGCCTTCTACATCTACAACCGCCTGCTGCTGCACATGGCCGCCGGGCAGCCGATCGTGAAGTCGATCGAGCACGCGCTCCTCGAGGTCGGCATGGCGACCATCTTCACCGCGATCACGCTGGCGATCGGCGTGGCCACCTGGTCGTTCTCGCAGCTCAAGTTCCAGGCCGACATGGGCAAGCTGCTGGCCTTCATGTTCATGGTGAACATGGTGATGGCGATGACCGCGCTGCCCGCCATGGCCGTGTGGCTCGAGAAGCTCTTTCCGCGCCGCCGTCCGGTGCGGGCGACCGGCCTTCAACATCACTGA
PROTEIN sequence
Length: 796
VPASSDNGSALLRAVHRFETFAFSNRRAVLAVMAVFTLAMGYFAIQLRMDAGFDKQMPVGHEYIQTFQTYREDVLGANRLNIVVKARRGSIWNAAALERLYDVTQAVTFLPNIERLGVQSLWTPNSFVNEITEEGFRADPLIDATITPGQLTDETVADIRRAAAQGGFVGTLVSRDETAAMITAELIEYDAQGAKLDYIDYNHLLEERIRSKFEDADFEIQIIGFAKQIGDIADGAQSVLKFCAIALLLTAAAVYWYCRSLRFTLLAIACSLTSLVWQFGTLRLLGFGLDPLAVLVPFLVFAIGVSHGVQQINYIVRRISYGQSNFDACRDSFTGLLIPGTLALVTAFVSFVTLLLIPIPMVRELAIAASLGVAYKIVTNLVMLPVAASFFDVSKDYADQAVVQRERRSGWLRVLAKVAEPRNALLMLAVTATVFAAAAWQSRDRVVGTLQPGAPELREDARFNRDAVAISSNFDTGLDWLTVIFEAPPDSCENVNIGLYQDRFTWAMHPVEGVLSVASYSGQLRLYNEGYNEGNPKMSVVPIDPGNYAALSTEIARIRGTMRKDCSMTAVNLFLTDHKATTIQRVIDAVKEFRGRNTLPGVSIRLASGNAGVLAAIDDEVEKSELPMMLYVYAAIVVLVFLVYRDLRAVIACCLPLTVGTFVGYWFMKELQIGLTVATLPVMVLAVGIGVDYAFYIYNRLLLHMAAGQPIVKSIEHALLEVGMATIFTAITLAIGVATWSFSQLKFQADMGKLLAFMFMVNMVMAMTALPAMAVWLEKLFPRRRPVRATGLQHH*