ggKbase home page

SCNpilot_expt_1000_bf_scaffold_156_curated_1

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 249..1925

Top 3 Functional Annotations

Value Algorithm Source
cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5] similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 493.0
  • Bit_score: 378
  • Evalue 5.10e-102
Probable Cytidine deaminase n=1 Tax=Idiomarina baltica OS145 RepID=A3WNN0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 525.0
  • Bit_score: 418
  • Evalue 8.40e-114
Cytidine/deoxycytidylate deaminase family protein {ECO:0000313|EMBL:KIH80782.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 524.0
  • Bit_score: 587
  • Evalue 1.90e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas batumici → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
GTGCCTTCACGCAAAGCACGTACTGTAACCTCGAGGCAATCGGCTGCTTCAGACGCTGAGCGGGTAGACAATTCCCCGCTTGTTGCCAAGCCGTGCCCTGAGGTGGTCATAGGTTTGGTCGGCCCTGTTGGCATCGACTTGGATCCGATCATCGATGTGCTCATCCGCCGGCTGGAAGCCGTCGAGTACAGAGCCGTGCCTGTCCGATTGAGCGCACAGATCGAGAAGTTCTTTGGTGTTGACCATTCGGACCTGCCGGAGGACGAGCGAATCGAGAAGCTGATGGATGCCGGCACAAGGCTTCGTGAGAACAGCGAACGCGGTGAGGCCGTCGCTTTGTTGGCGATCGCGGAAATTCGACGCATTCGACAGCAAGAACTGAGCGGATCAGTCGAAGGCAACGCCTACATCTTGCGGTCGTTGAAGCACCCCGACGAGGTGGAAACCTTGCGGGCGGTTTACGGCAAAGGCTTTTTCCTGATCTCGGCTTATGCTCCTCGCGACGCGCGGGTGTCTGCCATGGCGGAGAAGGTCATGCGATCTCAGCATGGCAACCCAAACCATTCACGTGAGAAAGCCGAAGCCATCGTTGAGCGCGATGAACAGGAAGAGAACAAAGATCTTGGCCAGGACGTAAAGGATGCGTTTCCGCTGGCGGATTTGTTCATCGATGCGCGGGACAAGAAGTCCTTCGAGCCAGAGATTCGGCGTTTCGTCGAACTCGTCTTTGGCAACCTATTTCACACGCCAACGAAGGATGAGCATGGCATGTATCACGCTAGGTCAGCAGCTCTTCGATCTGCCGATCTTGGCAGACAGGTGGGTGCGGCGATCACCGCTTCGTCGGGCGAACTACTTGCACTGGGTTGCAACGATGTGCCGAAGGCCAGTGGAGACTTGTACTGGTCCGGTGACGATGGAGACGCAAGAGACTTCCAGCGTGGCTTCGACCCGATCGTTGAGGAGCGCAAGCAGATTCTGAGCGAGTTACTCGCTCGGCTTCAGAAGGCGGGCGTTCTTGCAAAGCCGTATATGGACGCCAAGGCGATCGTGCCGTTGGTCTCCACCCTCACGACGGGAGATAAGCGCGAGTTCCTAAAGGGAGCGCGCGTAATGAATCTGCTTGAGTTTGGACGATGCGTGCACGCCGAGATGGCCGCTATTACGTCTGCGGCGAGGCTTGGTGTTCCAATCAATGGCGCCACGCTGTACACAACAACGTTCCCGTGCCATATGTGCGCTCGGCACATCGTTTCGAGCGGGATCGCGCGAGTCGTCTATGTCGAGCCGTACCCAAAGAGTCGGGCGCGCCACTTGCACGGTGATGCCATTCAGGTCGACGCGCAGAAGCCTGTTCCCGGTTTGGTAGTCTTTGAACCGTTCGTCGGCATCGCTCCACGTCAGTACCAGGACATCTTTGATGCTAGAGACAGGCGGAAGGACTCGGCGGGGAGGATTTTCAACTGGCGGGTCAAGGGCAGGCGCCCGCAACCACGCTTCAGTAGGTTCAGGAACACGTATAGAGAAATCGAGGATGCTATTGTTGCCATCGAAGTACCACAGCTAGCGCGGAAGCTCGGTGTCGACTTGGATCACGAAGCCGCAGAGAGGAACGATCATGAAGAAGCCCATGACACTCGCCGAACAAGTAAGAGACGCGCAAAGAGCGGTAAATAG
PROTEIN sequence
Length: 559
VPSRKARTVTSRQSAASDAERVDNSPLVAKPCPEVVIGLVGPVGIDLDPIIDVLIRRLEAVEYRAVPVRLSAQIEKFFGVDHSDLPEDERIEKLMDAGTRLRENSERGEAVALLAIAEIRRIRQQELSGSVEGNAYILRSLKHPDEVETLRAVYGKGFFLISAYAPRDARVSAMAEKVMRSQHGNPNHSREKAEAIVERDEQEENKDLGQDVKDAFPLADLFIDARDKKSFEPEIRRFVELVFGNLFHTPTKDEHGMYHARSAALRSADLGRQVGAAITASSGELLALGCNDVPKASGDLYWSGDDGDARDFQRGFDPIVEERKQILSELLARLQKAGVLAKPYMDAKAIVPLVSTLTTGDKREFLKGARVMNLLEFGRCVHAEMAAITSAARLGVPINGATLYTTTFPCHMCARHIVSSGIARVVYVEPYPKSRARHLHGDAIQVDAQKPVPGLVVFEPFVGIAPRQYQDIFDARDRRKDSAGRIFNWRVKGRRPQPRFSRFRNTYREIEDAIVAIEVPQLARKLGVDLDHEAAERNDHEEAHDTRRTSKRRAKSGK*