name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_156_curated_1
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
249..1925
|
Probable Cytidine deaminase n=1 Tax=Idiomarina baltica OS145 RepID=A3WNN0_9GAMM
Cytidine/deoxycytidylate deaminase family protein {ECO:0000313|EMBL:KIH80782.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_2
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2279..2707)
|
Biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD id=12495230 bin=THIO_HI species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Tax=RBG_16_Betaproteobacteria_58_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_3
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2707..3456)
|
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB id=12495231 bin=THIO_HI species=Nevskia ramosa genus=Nevskia taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB
Tax=RBG_16_Betaproteobacteria_58_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3465..4214)
|
tonB1; putative TonB protein; K03832 periplasmic protein TonB id=12495232 bin=THIO_HI species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tonB1; putative TonB protein; K03832 periplasmic protein TonB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_5
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4259..5296)
|
O-methyltransferase family protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XZU7_9RHOO
O-methyltransferase family protein {ECO:0000313|EMBL:ENO84790.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
O-methyltransferase family protein
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_6
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5333..6364)
|
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Methylomicrobium album BG8 RepID=H8GIK4_METAL
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:EIC29031.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_7
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6382..7146)
|
phosphonate-transporting ATPase (EC:3.6.3.28); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component n=1 Tax=Methylomicrobium album BG8 RepID=H8GIK3_METAL
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:EIC29030.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_8
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7137..8180)
|
ABC-type Fe3+-siderophore transport system, permease component n=1 Tax=Methylomicrobium album BG8 RepID=H8GIK2_METAL
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:EIC29029.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
iron(III) ABC transporter-permease; K02015 iron complex transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8177..9274)
|
radical SAM protein; K01012 biotin synthetase [EC:2.8.1.6]
Radical SAM domain protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYX4_HYPDA
Radical SAM domain protein {ECO:0000313|EMBL:ADJ23576.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_10
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9415..10206)
|
fepC; ferric enterobactin transport ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter, ATP-binding protein, FepC family n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A876_PELCD
ABC transporter, ATP-binding protein, FepC family {ECO:0000313|EMBL:ABA87416.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_11
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10203..11240)
|
Transport system permease n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XSQ1_9RHOO
Transport system permease {ECO:0000313|EMBL:ENO84786.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
transporter permease; K02015 iron complex transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_12
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea
|
Not on your lists |
comp(11240..12283)
|
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEG5_METFS
ABC-type Fe3+-hydroxamate transport system, periplasmic component
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:AGB01688.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_13
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12283..13155)
|
TonB-dependent receptor n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RQZ2_ALLVD
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:ADC61820.1}; Flags: Precursor;; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_14 |
Not on your lists |
comp(13159..15369)
|
Putative TonB-dependent receptor n=1 Tax=mine drainage metagenome RepID=E6QAY5_9ZZZZ
Putative TonB-dependent receptor {ECO:0000313|EMBL:CBI04361.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_15
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15491..16516)
|
radical SAM protein; K01012 biotin synthetase [EC:2.8.1.6]
Radical SAM domain protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYX4_HYPDA
Radical SAM domain protein {ECO:0000313|EMBL:ADJ23576.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_16
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(16538..17617)
|
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein id=12495234 bin=THIO_HI species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:CEO88334.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17643..19877)
|
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=12495238 bin=THIO_HI species=Nitrobacter hamburgensis genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:ABE61810.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_18
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(19886..20929)
|
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein id=12495234 bin=THIO_HI species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Periplasmic binding protein {ECO:0000313|EMBL:CEO88334.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
periplasmic binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20961..23171)
|
TonB-dependent receptor n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXY8_9BRAD
TonB-dependent receptor {ECO:0000313|EMBL:EAQ35150.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23700..25418
|
CRISPR-associated protein Cas4 n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035C35B9
CRISPR-associated Cas1/Cas4 family protein; K15342 CRISP-associated protein Cas1
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25428..25721
|
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLF5_THISH
CRISPR-associated Cas2 family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_22
unknown
|
Not on your lists |
comp(28058..28204)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_156_curated_23
unknown
|
Not on your lists |
comp(32597..33298)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_156_curated_24
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34549..36123)
|
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8I2_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS87259.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_25
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36124..37083)
|
CRISPR-associated protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000368CF30
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73518.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_26
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37073..39313)
|
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLG4_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73519.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_27
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(39310..41799)
|
Putative helicase (CRISPR associated) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z1U1_AZOL4
putative helicase (CRISPR associated); K07012
Putative helicase (CRISPR associated) {ECO:0000313|EMBL:CBS87256.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_28
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
42266..42472
|
Transcriptional regulator, AbrB family n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLG0_THISH
AbrB family transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_65_10_curated
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_29
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
42469..42852
|
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00037B16CC
PilT domain-containing protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
|
|
SCNpilot_expt_1000_bf_scaffold_156_curated_30
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(42885..43640)
|
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQM6_9BURK
type 11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
|