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SCNpilot_expt_1000_bf_scaffold_116_curated_10

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(16590..17222)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Caldimonas manganoxidans RepID=UPI00036D94B0 similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 209.0
  • Bit_score: 280
  • Evalue 1.30e-72
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 209.0
  • Bit_score: 279
  • Evalue 9.40e-73
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACB33862.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 209.0
  • Bit_score: 279
  • Evalue 4.20e-72

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGATCCGCGTCGTGCTGGTGGACGATCACGCGCTGATCCGCCGCGGGCTGCGCGAAACGCTCACCGAGGCCGGCGGCATCGAGGTGGTGGGCGAGGCGGGCAGCTACGCCGAGCTGCGCGCCGTGCTGCGCGAGGTGCGCTGCGAGGTCATCCTGCTCGACCTCAACCTGCCGGGACGCAGCGGCATGGACGTGCTCGCGGCACTGGCGGCCGACGGCAGTCCGGTGCGGGTGGTGGTGCTCTCGCAGTATCCGGAAGACCAGTACGGCATCCGTGCGCTGCGCGCCGGCGCCATGGCCTACCTGAACAAGTCGGCCGAGCCGGCACGCATCGTCGAGGCGGTGCGCGCCGTGGCAGGCGGGCGCAAGTACCTGACCCCGGAAGTGGCGCACCTGCTGCTCGATACCGTCACCGGCAAGGCCGCGGAGGCGGCGCACGACCAGCTCTCGGAGCGCGAGATGCAGACCCTGATGATGATCGCCTCCGGGCGCAAGCTCTCGGAGATCGCCCAGGCGCTGTCGCTGTCGCCCAAGACGGTGAGCGTGTATCGCGCCCGCGTGCTCGAGAAGCTCGGCGTCTCCAGCAACGCCGAGCTGGCATCCTACGCACTGCGCAACGGGTTGATCGAGTAG
PROTEIN sequence
Length: 211
MIRVVLVDDHALIRRGLRETLTEAGGIEVVGEAGSYAELRAVLREVRCEVILLDLNLPGRSGMDVLAALAADGSPVRVVVLSQYPEDQYGIRALRAGAMAYLNKSAEPARIVEAVRAVAGGRKYLTPEVAHLLLDTVTGKAAEAAHDQLSEREMQTLMMIASGRKLSEIAQALSLSPKTVSVYRARVLEKLGVSSNAELASYALRNGLIE*