name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_116_curated_1
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
171..731
|
UPI0003CDFF50 related cluster n=1 Tax=unknown RepID=UPI0003CDFF50
Uncharacterized protein {ECO:0000313|EMBL:ESY77335.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_2
Idiomarina sp. MCCC 1A10513, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1063..1458)
|
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L3Z1_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KFZ29921.1}; TaxID=1517416 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. MCCC 1A10513.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1682..3448
|
methyl-accepting chemotaxis sensory transducer; K05874 methyl-accepting chemotaxis protein I, serine sensor receptor id=12552065 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
methyl-accepting chemotaxis sensory transducer; K05874 methyl-accepting chemotaxis protein I, serine sensor receptor
Tax=CG_Rhodof_02
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_4
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3477..6521
|
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IYB1_9GAMM
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EGW20033.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_5
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6518..9955)
|
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI00036DCAC6
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EGW20036.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
multi-sensor hybrid histidine kinase
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_6
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10312..10914
|
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003647FC4
Plasmid pGal_D78, complete sequence {ECO:0000313|EMBL:AHD11954.1}; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter gallaeciensis DSM 26640.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10839..12731)
|
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000377872B
Bacteriophytochrome-like protein {ECO:0000313|EMBL:EGJ11697.1}; Flags: Fragment;; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_8
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12913..15156
|
Cyclic di-GMP phosphodiesterase Gmr {ECO:0000313|EMBL:EWS61917.1}; EC=3.1.4.52 {ECO:0000313|EMBL:EWS61917.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Sensory box/response regulator n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJS2_METPP
sensory box/response regulator
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_9
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15153..16547
|
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RX86_9BURK
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFV94882.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
GGDEF domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_10
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16590..17222)
|
LuxR family transcriptional regulator n=1 Tax=Caldimonas manganoxidans RepID=UPI00036D94B0
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACB33862.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_11
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17219..18334)
|
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000364F32D
response regulator receiver sensor signal transduction histidine kinase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_12
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18489..19352
|
cheR; MCP methyltransferase, CheR-type (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003655784
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19349..19993
|
cheD; chemoreceptor glutamine deamidase CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44]
chemotaxis protein CheD n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034B0445
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19990..21111
|
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
cheB; protein-glutamate methylesterase CheB (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVH9_9BURK
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_15
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21054..21560
|
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDA6_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93545.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_16
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21587..21967
|
Response regulator receiver protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XX84_LEPCP
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21964..24201
|
cheA; chemotaxis sensor histidine kinase CheA (EC:2.7.13.3); K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Chemotaxis sensor histidine kinase CheA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW85_RUBGI
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_18
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24337..24879
|
CheW protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZR8_RHOFD
CheW protein; K03408 purine-binding chemotaxis protein CheW
Tax=GWA2_Curvibacter_64_110_curated
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_19
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24921..26999
|
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUW4_9BURK
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_20
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27042..27440
|
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUQ7_9BURK
cheY; chemotaxis protein CheY; K03413 two-component system, chemotaxis family, response regulator CheY
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_21
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27466..28104
|
Protein phosphatase CheZ n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y366_LEPCP
chemotaxis phosphatase, CheZ; K03414 chemotaxis protein CheZ
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_22
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28129..28890)
|
Flagellar biosynthetic protein fliR n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RX84_9BURK
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
fliR; flagellar biosynthesis protein; K02421 flagellar biosynthetic protein FliR
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_23
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28887..29171)
|
fliQ; flagellar biosynthesis protein FliQ; K02420 flagellar biosynthetic protein FliQ
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_24
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29179..29991)
|
flagellar biosynthesis protein FliP n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C3EED
fliP; flagellar biosynthetic protein FliP; K02419 flagellar biosynthetic protein FliP
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_25
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29972..30310)
|
Flagellar biosynthesis protein FliO n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKS8_BORPD
fliO; flagellar biosynthesis protein FliO; K02418 flagellar protein FliO/FliZ
Flagellar biosynthesis protein FliO {ECO:0000313|EMBL:CAP42479.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_26
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30313..30753)
|
Type III secretion system outer membrane O protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GTY0_9BURK
flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_27
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30740..31744)
|
Flagellar motor switch protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SD95_METPP
fliM; flagellar motor switch protein; K02416 flagellar motor switch protein FliM
Flagellar motor switch protein {ECO:0000313|EMBL:ABM93534.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31776..32345)
|
flagellar basal body-associated protein FliL; K02415 flagellar FliL protein id=12553366 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
flagellar basal body-associated protein FliL; K02415 flagellar FliL protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_29
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32438..33634)
|
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037A21B0
fliK; flagellar hook-length control protein; K02414 flagellar hook-length control protein FliK
Flagellar hook-length control protein {ECO:0000313|EMBL:ABM93532.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_116_curated_30
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33631..34077)
|
Flagellar export protein FliJ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIS1_9BURK
Flagellar biosynthesis protein FliJ {ECO:0000313|EMBL:KIF82149.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
flagellar export protein FliJ; K02413 flagellar FliJ protein
|