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SCNpilot_expt_1000_bf_scaffold_116_curated_13

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 19349..19993

Top 3 Functional Annotations

Value Algorithm Source
cheD; chemoreceptor glutamine deamidase CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 204.0
  • Bit_score: 297
  • Evalue 2.60e-78
chemotaxis protein CheD n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034B0445 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 202.0
  • Bit_score: 305
  • Evalue 5.20e-80
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 203.0
  • Bit_score: 307
  • Evalue 1.90e-80

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Taxonomy

R_Burkholderiales_69_20 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGACGGGCTCGCGTCTGAGTCGGTTGCGGGCGGCGCCGCGCCGCCCCGGCGAGGCCTCCTTCTTCTGGTACGACACGCACTTCGGCAACGAAGCGGTGAAGGTGCTGCCCGGCGAGTACTTCGTCGAGAGCGAGGACATCCTCATCATGACGACGCTCGGCTCCTGCATCGCGGCGTGCCTGTGGGATCGCGATCGCCGCATCGGCGGCATGAACCACTTCATGCTGCCCGAGGGTGACGCAGTGGACGGACGCTACGGATCGTACGCGATGGAGCTGCTGGTCAACGAGCTGCTGCGCCGCGGCGCGGCGCGCACTTCCCTCGATGCGAAAGTGTTCGGCGGCGCGCAGGTGATCGCCGGAATGGACTCCGTGAACGTGGGTGAGCGCAATACGCGCTTCGTGCTCGAATACCTGAGGACCGAGGGCATCCCGGTGGTCGCCCGCGACGTGCTCGACGTGCATCCGCGCAAGGTGTGCTTCATGCCGGCGAGCGGGCGCGTCGTGGTCAAGCGGCTGATGGCGTCGAAGGCGGCGGCGCTGCAGCAGCAGGATCGCGCGGCTGCCCAGCGCGCGCGGCCGGCCGCGACCGGCGGCGGCACCGTCGATCTCTTCGTCGACCCGGCGCCGGAGGCGCGCCGATGA
PROTEIN sequence
Length: 215
MTGSRLSRLRAAPRRPGEASFFWYDTHFGNEAVKVLPGEYFVESEDILIMTTLGSCIAACLWDRDRRIGGMNHFMLPEGDAVDGRYGSYAMELLVNELLRRGAARTSLDAKVFGGAQVIAGMDSVNVGERNTRFVLEYLRTEGIPVVARDVLDVHPRKVCFMPASGRVVVKRLMASKAAALQQQDRAAAQRARPAATGGGTVDLFVDPAPEARR*