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SCNpilot_expt_500_p_scaffold_1187_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1187_curated_1
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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309..2312
DNA (2004bp) protein (668aa)
transposase, partial n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACF4
Uncharacterized protein {ECO:0000313|EMBL:AIK96235.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
transposase Tn3 family protein
SCNpilot_expt_500_p_scaffold_1187_curated_2
unknown

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2480..2884
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1187_curated_3
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

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comp(2887..3126)
DNA (240bp) protein (80aa)
Resolvase domain protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9Y1H0_STAC7
Resolvase domain protein
Resolvase domain protein {ECO:0000313|EMBL:AFZ38251.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
SCNpilot_expt_500_p_scaffold_1187_curated_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3199..5433)
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EST5_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06287.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_expt_500_p_scaffold_1187_curated_5
unknown

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5858..6559
DNA (702bp) protein (234aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1187_curated_6
unknown

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6621..7577
DNA (957bp) protein (319aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1187_curated_7
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7591..9282
DNA (1692bp) protein (564aa)
Protease, S2 family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LQ51_RUEPO
S2 family protease
Protease, S2 family {ECO:0000313|EMBL:AAV95890.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
SCNpilot_expt_500_p_scaffold_1187_curated_8
Piscirickettsia salmonis, Piscirickettsia, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9358..9939)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXI7_9BRAD
Phage integrase family protein {ECO:0000313|EMBL:KGP94751.1}; TaxID=1238 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Piscirickettsia.;" source="Piscirickettsia salmonis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1187_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10231..10479
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=2 Tax=Rickettsia bellii RepID=A8GWD0_RICB8
Uncharacterized protein {ECO:0000313|EMBL:AIL13932.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1187_curated_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10469..10858
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=2 Tax=Rickettsia bellii RepID=A8GWC9_RICB8
Uncharacterized protein {ECO:0000313|EMBL:AIL13931.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1187_curated_11
unknown

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comp(11026..11505)
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1187_curated_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11505..13697)
DNA (2193bp) protein (731aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12323.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1187_curated_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13882..14112
DNA (231bp) protein (77aa)
transposase IS4 family protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BB44
Uncharacterized protein {ECO:0000313|EMBL:AIL13890.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transposase, IS4 family protein
SCNpilot_expt_500_p_scaffold_1187_curated_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14109..14639
DNA (531bp) protein (177aa)
transposase IS4 family protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BB44
Uncharacterized protein {ECO:0000313|EMBL:AIL13890.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Transposase of ISAli17, IS5 family, subgroup IS903
SCNpilot_expt_500_p_scaffold_1187_curated_15
unknown

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15038..15538
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1187_curated_16
unknown

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15541..16191
DNA (651bp) protein (217aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1187_curated_17
unknown

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16632..16805
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1187_curated_18
unknown

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comp(17464..17862)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1187_curated_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18434..18700
DNA (267bp) protein (89aa)
IS1400 transposase A n=239 Tax=Enterobacteriaceae RepID=Q0P7I9_ECOLX
Transposase {ECO:0000313|EMBL:AIL12647.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transposase
SCNpilot_expt_500_p_scaffold_1187_curated_20
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18958..19539
DNA (582bp) protein (194aa)
Transposase subunit n=1 Tax=Escherichia coli CAG:4 RepID=R6UAM5_9ESCH
Transposase subunit {ECO:0000313|EMBL:CDC82768.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
transposase subunit; K07497 putative transposase
Displaying 20 items

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