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SCNpilot_expt_500_p_scaffold_2516_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2516_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1231
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QP02_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13624.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
virB4-2; type IV secretion system ATPase VirB4; K03199 type IV secretion system protein VirB4
SCNpilot_expt_500_p_scaffold_2516_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1201..1956
DNA (756bp) protein (252aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13625.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2516_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1959..3002
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8B0W0_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIL13626.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
membrane protein of unknown function
SCNpilot_expt_500_p_scaffold_2516_curated_4
unknown

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3014..3178
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2516_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3169..3837
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3A4A0
Uncharacterized protein {ECO:0000313|EMBL:AIL13900.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
COMB1; hypothetical protein; K03203 type IV secretion system protein VirB8
SCNpilot_expt_500_p_scaffold_2516_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3824..4780
DNA (957bp) protein (319aa)
ComB2 protein n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S822_PHAFV
Uncharacterized protein {ECO:0000313|EMBL:AIL13628.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
type IV secretion system protein VirB9
SCNpilot_expt_500_p_scaffold_2516_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4777..5805
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Vibrio ordalii RepID=UPI00024835CA
Uncharacterized protein {ECO:0000313|EMBL:AIL13745.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2516_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5802..7952
DNA (2151bp) protein (717aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13630.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2516_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7949..8884
DNA (936bp) protein (312aa)
virB11; ATPase (EC:3.6.1.-)
hypothetical protein, partial n=1 Tax=Kiloniella laminariae RepID=UPI00035E82DB
Uncharacterized protein {ECO:0000313|EMBL:AIL13896.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2516_curated_10
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8881..9375
DNA (495bp) protein (165aa)
Invasion protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EIG2_9RHOB
Invasion protein {ECO:0000313|EMBL:ESW59947.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
transglycosylase-putative
SCNpilot_expt_500_p_scaffold_2516_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9350..11296
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1E3X3_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AIL13632.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
trag family protein; K03205 type IV secretion system protein VirD4
Displaying 11 items

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