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SCNpilot_expt_500_p_scaffold_625_curated

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_625_curated_1
unknown

Not on your lists

216..518
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_625_curated_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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612..1553
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESV3_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06177.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_expt_500_p_scaffold_625_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1612..4245)
DNA (2634bp) protein (878aa)
DNA mismatch repair protein MutS n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GLM2_9PROT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
SCNpilot_expt_500_p_scaffold_625_curated_4
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4300..4863)
DNA (564bp) protein (188aa)
Uncharacterized protein n=4 Tax=Legionella pneumophila RepID=Q5WS13_LEGPA
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CEG57262.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_625_curated_5
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4976..5470
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EPQ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHE66903.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis ATCC 33761 = DSM 21215.;"
YbaK/aminoacyl-tRNA synthetase associated region
SCNpilot_expt_500_p_scaffold_625_curated_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5474..6124
DNA (651bp) protein (217aa)
Predicted metal-dependent Hydrolase related to alanyl-tRNA synthetase HxxxH domain n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SNZ8_HAHCH
metal-dependent hydrolase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
SCNpilot_expt_500_p_scaffold_625_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6299..7519
DNA (1221bp) protein (407aa)
2-polyprenyl-6-methoxyphenol hydroxylase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KW57_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13306.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ubiH; 2-polyprenyl-6-methoxyphenol hydroxylase
SCNpilot_expt_500_p_scaffold_625_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7522..8010)
DNA (489bp) protein (163aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rnhA; ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4]
RNaseH ribonuclease n=1 Tax=Legionella tunisiensis RepID=UPI00031E5193
SCNpilot_expt_500_p_scaffold_625_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8215..8733
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13308.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_625_curated_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8730..9761)
DNA (1032bp) protein (344aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Ferredoxin--NADP reductase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEG8_AZOBR
putative thioredoxin reductase,FAD/NAD(P)-binding
SCNpilot_expt_500_p_scaffold_625_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9780..10988)
DNA (1209bp) protein (403aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13310.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Permease of the major facilitator superfamily id=4908874 bin=GWC2_Alphaproteobacteria_42_16 species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
major facilitator superfamily permease
SCNpilot_expt_500_p_scaffold_625_curated_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11182..12381
DNA (1200bp) protein (400aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VIC6_9PROT
SCNpilot_expt_500_p_scaffold_625_curated_13

Not on your lists

comp(12289..13314)
DNA (1026bp) protein (342aa)
Heme A synthase id=4771430 bin=GWC2_Alphaproteobacteria_42_16 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Cytochrome oxidase assembly {ECO:0000313|EMBL:EKE09506.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15
SCNpilot_expt_500_p_scaffold_625_curated_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13375..13872)
DNA (498bp) protein (166aa)
Transcription factor CarD-like n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U0M8_9PROT
CarD family transcriptional regulator {ECO:0000313|EMBL:AIL13312.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transcriptional regulator; K07736 CarD family transcriptional regulator
SCNpilot_expt_500_p_scaffold_625_curated_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14073..14960)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNI7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AIL13313.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein
SCNpilot_expt_500_p_scaffold_625_curated_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14957..15805)
DNA (849bp) protein (283aa)
Zinc ABC transporter permease {ECO:0000313|EMBL:AIL13314.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ABC family transporter permease protein id=4018944 bin=GWC2_Alphaproteobacteria_42_16 species=Hyphomicrobium sp. genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
ABC transporter permease
SCNpilot_expt_500_p_scaffold_625_curated_17
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15795..16568)
DNA (774bp) protein (258aa)
ABC transporter related protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z3E8_9NEIS
ABC transporter {ECO:0000313|EMBL:KHJ54659.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
znuC; cation ABC transporter ATP-binding protein; K02074 zinc/manganese transport system ATP-binding protein
SCNpilot_expt_500_p_scaffold_625_curated_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16808..17512
DNA (705bp) protein (235aa)
Cell division transport system ATP-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5A5_AZOS1
Uncharacterized protein {ECO:0000313|EMBL:AIL13315.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ftsE; cell division transport system ATP-binding protein; K09812 cell division transport system ATP-binding protein
SCNpilot_expt_500_p_scaffold_625_curated_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17505..18395
DNA (891bp) protein (297aa)
cell division protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6AF79
Uncharacterized protein {ECO:0000313|EMBL:AIL13316.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K09811 cell division transport system permease protein
SCNpilot_expt_500_p_scaffold_625_curated_20
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18396..18983
DNA (588bp) protein (196aa)
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ACR8_ALKEH
SCNpilot_expt_500_p_scaffold_625_curated_21
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18998..19609
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ATQ8_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIL13317.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
conserved exported protein of unknown function
SCNpilot_expt_500_p_scaffold_625_curated_22
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19606..20334
DNA (729bp) protein (243aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003626B3A
Uncharacterized protein {ECO:0000313|EMBL:AIL13318.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_625_curated_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20331..21398
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NW04_AZOS1
Uncharacterized protein {ECO:0000313|EMBL:AIL13319.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_625_curated_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21443..22183)
DNA (741bp) protein (247aa)
ubiquinone biosynthesis O-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JAK3_9PROT
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_625_curated_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22286..23524
DNA (1239bp) protein (413aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Aspartokinase (EC:2.7.2.4)
aspartate kinase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B6E624
SCNpilot_expt_500_p_scaffold_625_curated_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23661..24431
DNA (771bp) protein (257aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13324.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_625_curated_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24640..25800
DNA (1161bp) protein (387aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13325.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_625_curated_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25805..26758)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036C08A9
Uncharacterized protein {ECO:0000313|EMBL:AIL13326.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
diguanylate cyclase/phosphodiesterase
SCNpilot_expt_500_p_scaffold_625_curated_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26910..27629)
DNA (720bp) protein (240aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56]
Ribonuclease PH n=1 Tax=alpha proteobacterium BAL199 RepID=A8U071_9PROT
SCNpilot_expt_500_p_scaffold_625_curated_30
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27708..28742
DNA (1035bp) protein (345aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLR9_9PROT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hrcA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor
Displaying items 1-30 of 34 in total

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