ggKbase home page

SCNpilot_expt_500_p_scaffold_3027_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3027_curated_1
unknown

Not on your lists

comp(3..164)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3027_curated_2
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(318..1157)
DNA (840bp) protein (280aa)
Leucine-rich repeat containing protein {ECO:0000313|EMBL:AKB37101.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
Leucine rich repeat protein id=1943486 bin=GWB2_Ignavibacteria_35_12 species=Leptospira borgpetersenii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
probable leucine-rich repeat receptor-like protein kinase At1g35710-like
SCNpilot_expt_500_p_scaffold_3027_curated_3
unknown

Not on your lists

comp(1193..1513)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3027_curated_4
unknown

Not on your lists

2563..2904
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3027_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3261..4469
DNA (1209bp) protein (403aa)
Phage portal protein, HK97 n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225C130
Portal protein {ECO:0000313|EMBL:AIL12718.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
HK97 family phage portal protein
SCNpilot_expt_500_p_scaffold_3027_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4494..5033
DNA (540bp) protein (180aa)
HK97 family phage prohead protease n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225C131
Uncharacterized protein {ECO:0000313|EMBL:AIL12719.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative prohead protease GP4; K06904
SCNpilot_expt_500_p_scaffold_3027_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5049..5432
DNA (384bp) protein (128aa)
Prevent-host-death family protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UM44_CYAP2
Uncharacterized protein {ECO:0000313|EMBL:AIL12720.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
prevent-host-death family protein
SCNpilot_expt_500_p_scaffold_3027_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5429..5806
DNA (378bp) protein (126aa)
PIN domain protein n=1 Tax=Rickettsia monacensis IrR/Munich RepID=U6EIS5_9RICK
Twitching motility protein PilT {ECO:0000313|EMBL:AIL12721.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
PilT domain-containing protein
SCNpilot_expt_500_p_scaffold_3027_curated_9
unknown

Not on your lists

6060..6479
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3027_curated_10
unknown

Not on your lists

comp(6587..8239)
DNA (1653bp) protein (551aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3027_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8292..8804)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BAC1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12724.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K09928 hypothetical protein
SCNpilot_expt_500_p_scaffold_3027_curated_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8929..9495
DNA (567bp) protein (189aa)
tag; DNA-3-methyladenine glycosylase I; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase n=1 Tax=Methylomicrobium buryatense RepID=UPI00034B2692
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:AIL12726.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3027_curated_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9482..10882)
DNA (1401bp) protein (467aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
fumC; class II fumarate hydratase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KLR9_MICAA
SCNpilot_expt_500_p_scaffold_3027_curated_14
unknown

Not on your lists

comp(10983..11684)
DNA (702bp) protein (234aa)

This feature has no annotations

Displaying 14 items

View Taxonomy