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SCNpilot_expt_500_p_scaffold_1209_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1209_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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152..643
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4DF4D
Uncharacterized protein {ECO:0000313|EMBL:AIL12793.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1209_curated_2
unknown

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660..1217
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1209_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1348..2781
DNA (1434bp) protein (478aa)
Putative Flp pilus assembly protein TadG n=1 Tax=Azospirillum brasilense Sp245 RepID=G8B071_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIL12794.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative Flp pilus assembly protein TadG
SCNpilot_expt_500_p_scaffold_1209_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2774..3742)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036F3B84
Uncharacterized protein {ECO:0000313|EMBL:AIL12795.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1209_curated_5
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3907..4461
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:AIK96948.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
Peptidase A24A prepilin type IV id=4908870 bin=GWC2_Alphaproteobacteria_42_16 species=Sinorhizobium medicae genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_p_scaffold_1209_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4466..5263
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12796.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Flp pilus assembly CpaB id=4908868 bin=GWC2_Alphaproteobacteria_42_16 species=Novosphingobium aromaticivorans genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Flp pilus assembly CpaB; K02279 pilus assembly protein CpaB
SCNpilot_expt_500_p_scaffold_1209_curated_7
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5269..6732
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGS7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIK96950.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
putative Pilus assembly protein cpaC; putative signal peptide
SCNpilot_expt_500_p_scaffold_1209_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6745..7416
DNA (672bp) protein (224aa)
Putative Pilus assembly protein CpaD n=1 Tax=Azospirillum brasilense Sp245 RepID=G8B061_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIL12797.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1209_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7438..8649
DNA (1212bp) protein (404aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12798.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Two-component response regulator id=4908865 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
two-component response regulator; K02282 pilus assembly protein CpaE
SCNpilot_expt_500_p_scaffold_1209_curated_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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8708..10126
DNA (1419bp) protein (473aa)
Pilus assembly protein id=4908864 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative type II/IV secretion system protein; K02283 pilus assembly protein CpaF
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_expt_500_p_scaffold_1209_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10123..11106
DNA (984bp) protein (328aa)
Type II secretion system F domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QAR9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AIL12799.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Flp pilus assembly protein TadB; K12510 tight adherence protein B
SCNpilot_expt_500_p_scaffold_1209_curated_12
R_Gammaproteobacteria_38_14, Gammaproteobacteria, Proteobacteria, Bacteria

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11112..12074
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000381C00A
type II secretion system protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_38_14_curated
SCNpilot_expt_500_p_scaffold_1209_curated_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12074..12553
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9R9_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AIL12800.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1209_curated_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12685..14919
DNA (2235bp) protein (745aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
UvrD/REP helicase id=4920983 bin=GWC2_Alphaproteobacteria_42_16 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_p_scaffold_1209_curated_15
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14929..15801
DNA (873bp) protein (291aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
ribosomal protein L11 methyltransferase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BDB8
prmA; ribosomal protein L11 methyltransferase
SCNpilot_expt_500_p_scaffold_1209_curated_16
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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15771..16220
DNA (450bp) protein (150aa)
fosA; Glutathione transferase fosA (Fosfomycin resistance protein) (EC:2.5.1.18)
Glutathione transferase fosA (Fosfomycin resistance protein) n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7I6K3_LEGPN
Glutathione transferase FosA {ECO:0000313|EMBL:GAN25664.1}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_expt_500_p_scaffold_1209_curated_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16350..17624
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Rickettsiaceae bacterium Os18 RepID=UPI0003749B01
Uncharacterized protein {ECO:0000313|EMBL:AIL12803.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
proP4; proline/betaine transporter
SCNpilot_expt_500_p_scaffold_1209_curated_18
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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17712..19055
DNA (1344bp) protein (448aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ADZ26292.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ADZ26292.1};; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
D-Ala-D-Ala carboxypeptidase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B424B2
SCNpilot_expt_500_p_scaffold_1209_curated_19
unknown

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comp(19187..19411)
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying 19 items

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