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SCNpilot_expt_500_p_scaffold_1903_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1903_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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180..1940
DNA (1761bp) protein (587aa)
argS2; arginine--tRNA ligase ArgS (EC:6.1.1.19)
arginyl-tRNA synthetase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039F87F3
Uncharacterized protein {ECO:0000313|EMBL:AIL13370.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1903_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1954..3750)
DNA (1797bp) protein (599aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000372524B
Uncharacterized protein {ECO:0000313|EMBL:AIL13367.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ATP-binding cassette subfamily B; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_expt_500_p_scaffold_1903_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3747..4076)
DNA (330bp) protein (110aa)
Protein CyaY n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2L9C0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13366.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
frataxin, mitochondrial-like
SCNpilot_expt_500_p_scaffold_1903_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4066..4683)
DNA (618bp) protein (206aa)
Dsba oxidoreductase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CB85_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AIL13365.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
DSBA oxidoreductase
SCNpilot_expt_500_p_scaffold_1903_curated_5
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4884..5669
DNA (786bp) protein (262aa)
surface lipoprotein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B2EBB7
surface lipoprotein; K04754 lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_expt_500_p_scaffold_1903_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5685..6317
DNA (633bp) protein (211aa)
Toluene tolerance transporter putative n=1 Tax=Oceanibaculum indicum P24 RepID=K2JQ09_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13364.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
toluene tolerance transporter putative
SCNpilot_expt_500_p_scaffold_1903_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6322..7044)
DNA (723bp) protein (241aa)
leader peptidase (prepilin peptidase) / N-methyltransferase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Eubacterium sp. CAG:248 RepID=R6JRU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AIL13363.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1903_curated_8

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7133..8797
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EUU3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09474.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
type II and III secretion system protein; K02453 general secretion pathway protein D
SCNpilot_expt_500_p_scaffold_1903_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8799..11840)
DNA (3042bp) protein (1014aa)
Acriflavin resistance protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GX52_9PROT
Multidrug transporter AcrB {ECO:0000313|EMBL:AIL13361.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
multidrug efflux transporter
SCNpilot_expt_500_p_scaffold_1903_curated_10
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11837..12928)
DNA (1092bp) protein (364aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRI5_MICAA
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEP09547.1}; TaxID=856793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
SCNpilot_expt_500_p_scaffold_1903_curated_11

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13034..13645
DNA (612bp) protein (204aa)
hypothetical protein COdytL_06467 id=4886490 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Uncharacterized protein {ECO:0000313|EMBL:EKE09731.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying 11 items

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