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SCNpilot_expt_500_p_scaffold_717_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_717_curated_1
unknown

Not on your lists

142..339
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_717_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(398..841)
DNA (444bp) protein (148aa)
Activator of polymer mobilization n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SRA5_RHOPH
Uncharacterized protein {ECO:0000313|EMBL:AIL13008.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
apm; Activator of polymer mobilization
SCNpilot_expt_500_p_scaffold_717_curated_3
unknown

Not on your lists

comp(993..1160)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_717_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1402..3552
DNA (2151bp) protein (717aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13009.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_717_curated_5
unknown

Not on your lists

comp(3618..3815)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_717_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3886..4446)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003747D14
Uncharacterized protein {ECO:0000313|EMBL:AIL13010.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transcriptional regulator, TetR family protein
SCNpilot_expt_500_p_scaffold_717_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4472..4975)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z715_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:AIL13011.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_717_curated_8
unknown

Not on your lists

comp(5054..5194)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_717_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5282..6268
DNA (987bp) protein (329aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rfaD; ADP-glyceromanno-heptose 6-epimerase (EC:5.1.3.20); K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
ADP-glyceromanno-heptose 6-epimerase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LHN4_9PROT
SCNpilot_expt_500_p_scaffold_717_curated_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6272..7081
DNA (810bp) protein (270aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
prolipoprotein diacylglyceryl transferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4369F
SCNpilot_expt_500_p_scaffold_717_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7068..8126
DNA (1059bp) protein (353aa)
Protein containing DUF185 n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PGI0_PSEUV
Uncharacterized protein {ECO:0000313|EMBL:AIL13014.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_717_curated_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8120..8875
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U7K9_RHIRD
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K05810 conserved hypothetical protein
SCNpilot_expt_500_p_scaffold_717_curated_13
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9305..10159
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037550B4
Uncharacterized protein {ECO:0000313|EMBL:EWH00200.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_717_curated_14
unknown

Not on your lists

10141..10302
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_717_curated_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10299..10838
DNA (540bp) protein (180aa)
hypothetical protein; K02137 F-type H+-transporting ATPase oligomycin sensitivity conferral protein [EC:3.6.3.14]
ATP synthase subunit delta n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XNU3_9BACT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_717_curated_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10838..12367
DNA (1530bp) protein (510aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ATP synthase subunit alpha n=1 Tax=uncultured bacterium RepID=K2EW86_9BACT
atpA; ATP synthase, F1 sector, alpha subunit
SCNpilot_expt_500_p_scaffold_717_curated_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12385..13269
DNA (885bp) protein (295aa)
ATP synthase gamma chain n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIS4_AZOBR
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
atpG; ATP synthase, F1 sector, gamma subunit
SCNpilot_expt_500_p_scaffold_717_curated_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13304..14722
DNA (1419bp) protein (473aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ATP synthase F1 subcomplex beta subunit id=4908612 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
ATP synthase F1 subcomplex subunit beta
SCNpilot_expt_500_p_scaffold_717_curated_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14741..15154
DNA (414bp) protein (138aa)
ATP synthase epsilon chain n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIS6_AZOBR
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
atpC; ATP synthase, F1 sector, epsilon subunit epsilon
SCNpilot_expt_500_p_scaffold_717_curated_20
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15208..15717)
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13021.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_717_curated_21
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15859..16773)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Burkholderia dolosa AUO158 RepID=A2W7X4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AIL13022.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K15268 O-acetylserine/cysteine efflux transporter
SCNpilot_expt_500_p_scaffold_717_curated_22
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17038..17763
DNA (726bp) protein (242aa)
acetoacetyl-CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07VA6_RHOP5
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:AIL13023.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_717_curated_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17834..18148
DNA (315bp) protein (105aa)
thioredoxin n=1 Tax=Acetobacter aceti RepID=UPI00022603FE
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
thioredoxin
SCNpilot_expt_500_p_scaffold_717_curated_24
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18206..20032
DNA (1827bp) protein (609aa)
Poly(3-hydroxyalkanoate) synthetase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly(3-hydroxyalkanoate) synthetase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TLN7_PHAFV
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:BAE52529.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCNpilot_expt_500_p_scaffold_717_curated_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20029..22221
DNA (2193bp) protein (731aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Cache sensor hybrid histidine kinase n=1 Tax=uncultured bacterium RepID=K2EL44_9BACT
ATPase
SCNpilot_expt_500_p_scaffold_717_curated_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22224..24023
DNA (1800bp) protein (600aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Xaa-Pro aminopeptidase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H2E0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13026.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_717_curated_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24020..24604)
DNA (585bp) protein (195aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase IM40_05135 {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
NADH dehydrogenase/NAD(P)H nitroreductase RutE; K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
Putative NADH dehydrogenase/NAD(P)H nitroreductase HypdeDRAFT_1929 id=4364461 bin=GWC2_Alphaproteobacteria_42_16 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_p_scaffold_717_curated_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24700..25350
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13028.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_717_curated_29
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25431..25922
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036F47D5
SIGNAL peptide protein {ECO:0000313|EMBL:AIZ63875.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_717_curated_30
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26200..27399
DNA (1200bp) protein (400aa)
Na+/H+ antiporter NhaA n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BC60
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
nhaA; pH-dependent sodium/proton antiporter; K03313 Na+:H+ antiporter, NhaA family
Displaying items 1-30 of 35 in total

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