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SCNpilot_expt_500_p_scaffold_1324_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1324_curated_1
unknown

Not on your lists

comp(537..1205)
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1324_curated_2
unknown

Not on your lists

comp(1211..1369)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1324_curated_3
unknown

Not on your lists

comp(1402..1851)
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1324_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2051..2509
DNA (459bp) protein (153aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; K01520 dUTP pyrophosphatase [EC:3.6.1.23]
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IMX9_9PROT
SCNpilot_expt_500_p_scaffold_1324_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2499..3002
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IW25_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:AIL12515.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1324_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3138..4598)
DNA (1461bp) protein (487aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12514.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1324_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4992..5369)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12513.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1324_curated_8
unknown

Not on your lists

comp(6502..7968)
DNA (1467bp) protein (489aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1324_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8193..8924)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYC0_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:AIL12509.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1324_curated_10
unknown

Not on your lists

9460..10644
DNA (1185bp) protein (395aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1324_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10639..11340)
DNA (702bp) protein (234aa)
Pirin domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D611_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12507.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
quercetin 2,3-dioxygenase yhhW
SCNpilot_expt_500_p_scaffold_1324_curated_12
unknown

Not on your lists

11480..12397
DNA (918bp) protein (306aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1324_curated_13
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12406..14019)
DNA (1614bp) protein (538aa)
ATP-binding cassette, subfamily F, member 3 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT11_9PROT
Putative ABC transporter ATP-binding protein YheS {ECO:0000313|EMBL:KKB96648.1}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
ATP-binding cassette protein
SCNpilot_expt_500_p_scaffold_1324_curated_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14107..14949
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI00035FE42F
Uncharacterized protein {ECO:0000313|EMBL:AIL12504.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Ion transport protein
SCNpilot_expt_500_p_scaffold_1324_curated_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15040..16203
DNA (1164bp) protein (388aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12501.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1324_curated_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16275..17936)
DNA (1662bp) protein (554aa)
60 kDa chaperonin n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AH50_AZOBR
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
groEL; large subunit of chaperonin GroESL
SCNpilot_expt_500_p_scaffold_1324_curated_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17970..18254)
DNA (285bp) protein (95aa)
UPI0003CDD38E related cluster n=1 Tax=unknown RepID=UPI0003CDD38E
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
chaperonin Cpn10; K04078 chaperonin GroES
Displaying 17 items

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