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SCNpilot_expt_500_p_scaffold_419_curated

Search features with annotation key words

Displaying items 31-41 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_419_curated_31
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(38929..40299)
DNA (1371bp) protein (457aa)
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
chromosomal replication initiator protein id=3780465 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
dnaA; chromosomal replication initiator protein dnaA
SCNpilot_expt_500_p_scaffold_419_curated_32
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(40472..40738)
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036DAF2A
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rpsT; 30S ribosomal protein S20
SCNpilot_expt_500_p_scaffold_419_curated_33
unknown

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comp(40825..41556)
DNA (732bp) protein (244aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_419_curated_34
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41684..42469)
DNA (786bp) protein (262aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TYJ7_9PROT
SCNpilot_expt_500_p_scaffold_419_curated_35
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42481..44274)
DNA (1794bp) protein (598aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
succinate dehydrogenase flavoprotein subunit id=2555858 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_p_scaffold_419_curated_36
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(44298..44645)
DNA (348bp) protein (116aa)
Succinate dehydrogenase, hydrophobic membrane anchor subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6C0_AZOL4
Succinate dehydrogenase {ECO:0000313|EMBL:KJR66124.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
sdhD; Succinate dehydrogenase, hydrophobic membrane anchor subunit; K00242 succinate dehydrogenase membrane anchor subunit
SCNpilot_expt_500_p_scaffold_419_curated_37
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44635..45030)
DNA (396bp) protein (132aa)
succinate dehydrogenase subunit C (EC:1.3.5.1); K00241 succinate dehydrogenase cytochrome b556 subunit
Succinate dehydrogenase subunit C n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A906_ALKEH
Uncharacterized protein {ECO:0000313|EMBL:AIL13614.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_419_curated_38
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45203..46273
DNA (1071bp) protein (357aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13613.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_419_curated_39
unknown

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46678..46935
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_419_curated_40
unknown

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comp(47159..48010)
DNA (852bp) protein (284aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_419_curated_41
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48669..49739
DNA (1071bp) protein (357aa)
Pentapeptide repeat protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VNW4_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AIL13923.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
pentapeptide repeat protein
Displaying items 31-41 of 41 in total

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