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SCNpilot_expt_500_p_scaffold_419_curated

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_419_curated_1
unknown

Not on your lists

1..252
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_419_curated_2
unknown

Not on your lists

342..920
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_419_curated_3
unknown

Not on your lists

859..1221
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_419_curated_4
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1414..2193)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82X32_NITEU
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:CAD84378.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
SCNpilot_expt_500_p_scaffold_419_curated_5
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2190..2984)
DNA (795bp) protein (265aa)
3''(2''),5''-bisphosphate nucleotidase {ECO:0000313|EMBL:ETO94534.1}; EC=3.1.3.7 {ECO:0000313|EMBL:ETO94534.1};; TaxID=1274403 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis RV-2-2007.;"
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7); K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UU05_SULAO
SCNpilot_expt_500_p_scaffold_419_curated_6
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2981..4882)
DNA (1902bp) protein (634aa)
Adenylylsulfate kinase/sulfate adenylyltransferase, subunit 1 {ECO:0000313|EMBL:ETO94535.1}; EC=2.7.1.25 {ECO:0000313|EMBL:ETO94535.1};; EC=2.7.7.4 {ECO:0000313|EMBL:ETO94535.1};; TaxID=1274403 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis RV-2-2007.;"
sulfate adenylyltransferase, large subunit; K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
Sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZTY1_PSEAC
SCNpilot_expt_500_p_scaffold_419_curated_7
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4882..5775)
DNA (894bp) protein (298aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
Sulfate adenylyltransferase subunit 2 n=2 Tax=Pseudogulbenkiania RepID=G2IVS4_PSEUL
SCNpilot_expt_500_p_scaffold_419_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6247..7458
DNA (1212bp) protein (404aa)
Glycosyl transferase, group 1 n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1DDD5_LARHH
Uncharacterized protein {ECO:0000313|EMBL:AIL12286.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Glycosyl transferase, group 1
SCNpilot_expt_500_p_scaffold_419_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7463..9352
DNA (1890bp) protein (630aa)
Asparagine synthetase (glutamine-hydrolyzing) (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
hypothetical protein n=1 Tax=Brevibacillus brevis RepID=UPI000363A179
Uncharacterized protein {ECO:0000313|EMBL:AIL12285.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_419_curated_10
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9395..10444
DNA (1050bp) protein (350aa)
UDP-N-acetylglucosamine 2-epimerase; K13019 UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
hypothetical protein n=1 Tax=Holospora obtusa RepID=UPI0003AEF6B5
Uncharacterized protein {ECO:0000313|EMBL:ETZ07158.1}; TaxID=1399147 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
SCNpilot_expt_500_p_scaffold_419_curated_11
unknown

Not on your lists

comp(10568..11044)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_419_curated_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11139..12011)
DNA (873bp) protein (291aa)
bifunctional protein folD (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
Bifunctional protein FolD n=1 Tax=Acinetobacter sp. CIP 102529 RepID=N8VXN9_9GAMM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_419_curated_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12029..12337)
DNA (309bp) protein (103aa)
Membrane protein {ECO:0000313|EMBL:AIL12280.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Putative uncharacterized protein id=4921030 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum rubrum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K02221 YggT family protein
SCNpilot_expt_500_p_scaffold_419_curated_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12435..16880)
DNA (4446bp) protein (1482aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12279.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_419_curated_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17011..18108)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Thermus islandicus RepID=UPI0003B6A4C4
Uncharacterized protein {ECO:0000313|EMBL:AIL12278.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
glycosyl transferase family protein
SCNpilot_expt_500_p_scaffold_419_curated_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18092..20011)
DNA (1920bp) protein (640aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Nostoc sp. PCC 7107 RepID=K9Q9K5_9NOSO
Uncharacterized protein {ECO:0000313|EMBL:AIL12277.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_419_curated_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20020..21189)
DNA (1170bp) protein (390aa)
aminotransferase DegT n=1 Tax=Holospora obtusa RepID=UPI0003AEA55A
Aminotransferase DegT {ECO:0000313|EMBL:AIL12276.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
degT/DnrJ/EryC1/StrS aminotransferase family protein
SCNpilot_expt_500_p_scaffold_419_curated_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21190..22740)
DNA (1551bp) protein (517aa)
oxidoreductase n=1 Tax=Holospora obtusa RepID=UPI0003AF03D2
Oxidoreductase {ECO:0000313|EMBL:AIL12275.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hexapeptide repeat-containing oxidoreductase rbh
SCNpilot_expt_500_p_scaffold_419_curated_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22753..24096)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037E4EF9
UDP-N-acetyl-D-glucosamine dehydrogenase {ECO:0000313|EMBL:AIL12274.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
nucleotide sugar dehydrogenase family protein
SCNpilot_expt_500_p_scaffold_419_curated_20
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24336..26435)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EH24_9BACT
Peptide transporter {ECO:0000313|EMBL:AIL12273.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
oligopeptide transporter, OPT family
SCNpilot_expt_500_p_scaffold_419_curated_21
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26607..28745)
DNA (2139bp) protein (713aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
RecG-like helicase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKY0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL12272.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_419_curated_22
unknown

Not on your lists

comp(28789..29010)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_419_curated_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29091..30902)
DNA (1812bp) protein (604aa)
poly(3-hydroxyalkanoate) polymerase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly(3-hydroxyalkanoate) polymerase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J335_POLGS
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:AIL12271.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_419_curated_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31005..31883)
DNA (879bp) protein (293aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
Phosphatidylserine synthase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JXL3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL12270.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_419_curated_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31834..32520)
DNA (687bp) protein (229aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Phosphatidylserine decarboxylase proenzyme id=2997811 bin=GWA1_Alphaproteobacteria_45_9 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
SCNpilot_expt_500_p_scaffold_419_curated_26
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32617..33780)
DNA (1164bp) protein (388aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC36.;"
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Glycoside hydrolase family 3 domain protein n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E7R8_FLESM
SCNpilot_expt_500_p_scaffold_419_curated_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33796..34083)
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12268.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_419_curated_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34095..36530)
DNA (2436bp) protein (812aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase, subunit B n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EVK4_9PROT
SCNpilot_expt_500_p_scaffold_419_curated_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36551..37714)
DNA (1164bp) protein (388aa)
DNA replication and repair protein RecF n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AS73_AZOBR
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
recF; DNA replication and repair protein recF
SCNpilot_expt_500_p_scaffold_419_curated_30
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37714..38823)
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
DNA polymerase III subunit beta n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B56EC2
dnaN; DNA polymerase III, beta-subunit
Displaying items 1-30 of 41 in total

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