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SCNpilot_expt_500_p_scaffold_1625_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1625_curated_1
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(113..925)
DNA (813bp) protein (271aa)
putative transcriptional regulator id=4468991 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated
SCNpilot_expt_500_p_scaffold_1625_curated_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(977..2293)
DNA (1317bp) protein (439aa)
General substrate transporter id=3827318 bin=GWC2_Alphaproteobacteria_42_16 species=Holospora undulata genus=Holospora taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
general substrate transporter; K03762 MFS transporter, MHS family, proline/betaine transporter
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_expt_500_p_scaffold_1625_curated_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2363..2818)
DNA (456bp) protein (152aa)
acetyltransferase n=1 Tax=Oceanobacillus sp. Ndiop RepID=UPI00028862C2
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KGJ93754.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio psychroerythus).;"
acetyltransferase
SCNpilot_expt_500_p_scaffold_1625_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2996..3271
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12688.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1625_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3302..3712
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12687.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1625_curated_6
unknown

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comp(3857..4378)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1625_curated_7
unknown

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comp(4397..4696)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1625_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4659..4982)
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13453.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1625_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5045..5404)
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13453.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1625_curated_10
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5467..5829)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DX43_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIK95574.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1625_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5917..6228)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13452.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1625_curated_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6435..6659
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B450
OmpA/MotB
Tax=GWA2_Deltaproteobacteria_65_63_curated
SCNpilot_expt_500_p_scaffold_1625_curated_13
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6725..9733)
DNA (3009bp) protein (1003aa)
Uncharacterized protein n=5 Tax=Legionella pneumophila RepID=Q5X164_LEGPA
hypothetical protein rbh
Multidrug resistance protein MdtC {ECO:0000313|EMBL:GAN28153.1}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_expt_500_p_scaffold_1625_curated_14
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9730..10728)
DNA (999bp) protein (333aa)
Transporter n=3 Tax=Legionella pneumophila RepID=U1RR86_LEGPN
hypothetical protein
Multidrug resistance protein MdtA {ECO:0000313|EMBL:GAN28152.1}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_expt_500_p_scaffold_1625_curated_15
unknown

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comp(10869..11507)
DNA (639bp) protein (213aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1625_curated_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11675..12130)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BSJ7_9GAMM
nucleic acid-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_expt_500_p_scaffold_1625_curated_17
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12120..12368)
DNA (249bp) protein (83aa)
Prevent-host-death family protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E4M4_9GAMM
Prevent-host-death family protein {ECO:0000313|EMBL:EGV29645.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
prevent-host-death family protein
SCNpilot_expt_500_p_scaffold_1625_curated_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12433..12978)
DNA (546bp) protein (182aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12681.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein COdytL_00495 id=2451658 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
SCNpilot_expt_500_p_scaffold_1625_curated_19
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12981..13442)
DNA (462bp) protein (154aa)
cell wall hydrolyses n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225C13A
Uncharacterized protein {ECO:0000313|EMBL:AIK96408.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1625_curated_20
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13446..13979)
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS40352.1}; Flags: Fragment;; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
SCNpilot_expt_500_p_scaffold_1625_curated_21
unknown

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comp(13991..14308)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1625_curated_22
unknown

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comp(14609..14917)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1625_curated_23
unknown

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comp(15453..15686)
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying 23 items

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