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SCNpilot_expt_500_p_scaffold_1741_curated_7

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 3482..7645

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 999.99
  • Bit_score: 2613
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 999.99
  • Bit_score: 1998
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S9K0_PHAFV similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 999.99
  • Bit_score: 2001
  • Evalue 0.0

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4164
ATGGCATTATCTATGGCTGGTCGCAAACGTATACGCAAAAGTTTTGAGAAATTAAGCGGTGTGGCTCCCATGCCGAATTTGATTGAACTTCAAAAAAATTCGTATGAAGCATTTTTACAAAGAAATATTCCATTTGAAAAAAGGCAGATGCTTGGGTTGCAAGCTGTTTTTCATTCTGTATTCCCAGTCAAAGACTTTGCCGATAAAGCTCAGTTGGAATTTTATCATTATGATTTTGATGAGCCAAAATATGATGTTGAAGAATGCCGTCAAAGAGGAGCGACGTATTCGGCTCCTTTGAAAGTTATCTTTAGATTGGTTGTGTGGGATGTGGATGAGGATACAGGCGCTCGTTCTATTCGCGATATTAAAGAGCAAGAAGTCTACATGGGTGATATTCCTCTCATGACAGATAATGGTACCTTTATTATCAATGGTGTTGAGCGCGTGATCGTTTCTCAAATGCATCGTTCCCCTGGAGTGTTTTTCGATCATGATCGTGGAAAGACGCATGCCTCTGGAAAATTACTCTTCTCAGGTCGTGTGATCCCTTACCGTGGGTCATGGTTAGACTTTGAATTTGATGCTAAAGACTTATTGTATGTTCGTATTGATCGTCGTAGAAAATTACATGCAACAACGCTTTTAATGGCGCTTGATAATCAGGAAACTACAAAAAAACGCCAAAAAGCTGAACAAGAAGGTAAAACTCTTGCTCCAGAAGAAGTTGCTGGGTTATCGCGTGAAGATATTTTAAAATTATTTTATGAGACGATTACTTTTACGCATCATAACAAAGGCTGGAAAATTCCTTTTGACCCTCTGCGTTGGAAAAGCGGAAAGCTTGCCCATGATCTTATTGATGTAAAAACGAATAAGGTTGTTTTAGAAGCTGGCGAAAAGATGACGCCACGATTGGCTAAGAAATTTAAGGAAGATGGTCTTAACGAAATTTTAGTTCCTTCAGATGATTTAATTGGTCGTTACGCAGCAGAAGATGTTATTAATGAAGAAACGGGTGAAATCTTTATTGAAGCTGGTGAAGAATTAACTGAGCAACTCATCCAAAATCTTATTTCAAATGGATTTAAGGCCATTACAACGCTTGCGATTGACCATATCCATATAGGACCCTATTTAAGAAATACGCTTGCTGCGGATCGTAATTATTCGAGAGAAGAAGCATTGCTTGATATTTATCGTGTAATGCGACCTGGCGAACCACCAACATTGGAAAGTGCGGAAGCTTTATTCTCAGGACTTTTCTTTGATTTTGAAAGATTTGATCTATCCGCTGTTGGTCGTGTAAAAATGAATGCACGTTTAGGATTAGAGACAGAAGACAGCATACGCACACTTCGTAAAGAAGATATTATTGCTATTGTGAAGATTCTTCTTGAGTTGAAAGATGGTCGTGGTGAGATTGATGACATCGATAATCTTGGAAACCGCCGTGTACGACCAGTTGGTGAGCTTCTTGAAAATCAATATCGTACGGGACTTTCAAGAATGGAAAGAGCAATTCGTGAACGAATGAGCTCAGTTGAAATCGACACTGTGATGCCTCATGATCTTATCAATGCAAAGCCTGTGTCCGGAGCAGTAAAAGAATTTTTTGCTTCTTCACAGCTTTCACAGTTTATGGATCAAGTTAATCCACTTGCCGAAATTACGCATAAGCGTCGTCTCTCTGCTTTAGGGCCAGGAGGTCTTACACGCGATCGTGCAGGTTTCGAGGTACGTGACGTGCATCCGACGCATTATGGCCGTATCTGTCCCATTGAAACGCCTGAAGGGCCGAATATTGGGTTAATTAACTCACTTGCAACCTTTGCACGCGTTAATAAGTATGGCTTTATTGAAAGTCCTTATCGTCGTGTTGTTGATGGTGTTGTGACCGATGAGATTGTTTATCTTTCTGCCGCAGAAGAAGGCAGGTACGCTATTGCGCAAGCTAGTGCTGCGATGAATAAAGATGGAAAGCTCTTAGAAGATTTCGTAAGTTGTCGTAAGGGTGGTGAATTCACAATTGCGCCCCCAAGTGACATCCAATTTATTGACGTTTCTCCAAAACAGCTGGTTTCAGTTGCGGCTTCCTTGATTCCATTCCTTGAGAATGACGATGCGAACCGTGCGTTGATGGGCTCTAACATGCAGCGCCAAGCTGTTCCTTTAATGCGTGCGGAGACACCGCTCGTTGGGACTGGTATGGAAAAATCTGTGGCACGGGATTCTGGTGTCACAGTTGTTGCAAAACGTGATGGTATTGTTGACCAAGTTGATGCGACTCGAATTGTTGTGCGTGTTAAAGAAACAACAGCCTCAAATCCTTCTGTTGTGGATATCTATAATTTGCAGAAATTTCAACGCTCTAACCAGAATACATGTATCAATCAACGGCCTCTGGTGCGCCCAGGTGAATTTGTGAAAGCTGGTGACATTATTGCGGATGGTCCTGCAACAGATGCTGGTGAATTAGCATTGGGTCGAAATGTTCTTGTTGGATTTATGTCTTGGAACGGATCAAACTTTGAAGACTCAATCATCCTCTCTGAACGTTTGGTGCGCGAAGACGTCTTTACTTCAATTCATATTGAAGAGTTTGAAGTCCACGCGCGTGATACGAAATTGGGACAAGAAGAAATTACCCGTGATATTCCTAACGTAGGTGATGAAGCTCTACGTCATTTGGATGAAGCAGGTATAGTCTCTATCGGTGCTGAAGTTAAACCTGGTGACATTCTTGTTGGAAAAGTAACGCCAAAAGGTGAGACACCAGTAACGCCTGAAGAAAAACTTTTACGTGCTATCTTTGGTGAAAAAGCCTCTGATGTGCGTGACACTTCTTTAAGAGTGCAACCGGGTGTTAGTGGTACGGTGGTTGAAGTTCGTGTCTTTTCACGTCGAGGCGTTGAAAAGGATGAGCGTGCGCTTGCCATCGAACGCGCTGAAATTAATCGTTTAGCAGCAGATCGTGATACAGAAAAAGGAATTCTTGAGCGAGCTTTCTTTGCACGCTTGAAGCAATTACTTTTAGATCAAAAAGCTGTAGGAGCTCCGAAAGGTGCAAAAACGAATGTCAAGATTGATGAAGCTTATCTAGAGGCTTTAACAACAGGTCAATGGCGTCAACTTGTTGTTGATAACGATGTCATCATGACTGAAATTGAAGCTTTGCGGAAACAGCATGATGAAGATGTTTCAGTCATTCAAAAGCGTTTTGAAGATAAAGTTGAAAAAGTGCGTCGCGGTGATGAACTTCCAACAGGTGTTCTTAAAACGGTTAAAGTCTTTATTGCAACAAAACGTAAGATTCAAGCTGGGGATAAAATGGCGGGGCGCCATGGAAACAAAGGTGTTGTGTCCGTTATTGTTCCTGAAGAAGATATGCCTCATCTTGAAGATGGGACACCCGTGGAGATTATTCTAAATCCATTAGGTGTGCCTTCGCGAATGAACGTAGGACAAATTTTAGAAACGCATCTTGGATGGGCTGCAGCTGGTTTAGGAAAGCAAATAAGCCAGATGCTTGGTGAGATTTATACCAACAATAAAAAGCCTGAAGACCTAAAAAAATGGATGGCAAGCATTTATCAAAAAGAAGCCGATATCAAGAAAATCGAAAATATGGATGAAGCAGAAGTGATAGAGACGGCTGCTTCTATGATTCGCGGTGTTCCAATGGCAACACCTGTTTTTGATGGCGCGCATGAAGATGATATTATCCGCGAGCTACAACGTGCAAATTTAAATACTTCCGGGCAAGTCATGTTAATCGATGGGAGAACAGGTGCGCCTTTTGAGCGCGCTGTCACAGTCGGCTATATTTACATGTTGAAATTAAGCCATATGGTTGATGATAAAATTCACGCTCGTTCTGTTGGACCTTACAGTTTGGTTACACAACAACCTCTCGGTGGTAAGGCACAGTTTGGTGGTCAGCGTTTTGGTGAAATGGAAGTTTGGGCTCTTGAAGCGTATGGCGCTGCTTATACATTACAAGAAATGCTTACCGTTAAATCAGACGATGTTTCTGGGCGTACAAAGGTTTATGAAGCCATTGTTCGAGGTGAAGATGCCTTTGAATCTGGTATCCCAGAATCCTTTAACGTTTTGGTAAAAGAATTGCGCTCGTTGAGTTTGAACCTCGAGTTTGGTGAATAG
PROTEIN sequence
Length: 1388
MALSMAGRKRIRKSFEKLSGVAPMPNLIELQKNSYEAFLQRNIPFEKRQMLGLQAVFHSVFPVKDFADKAQLEFYHYDFDEPKYDVEECRQRGATYSAPLKVIFRLVVWDVDEDTGARSIRDIKEQEVYMGDIPLMTDNGTFIINGVERVIVSQMHRSPGVFFDHDRGKTHASGKLLFSGRVIPYRGSWLDFEFDAKDLLYVRIDRRRKLHATTLLMALDNQETTKKRQKAEQEGKTLAPEEVAGLSREDILKLFYETITFTHHNKGWKIPFDPLRWKSGKLAHDLIDVKTNKVVLEAGEKMTPRLAKKFKEDGLNEILVPSDDLIGRYAAEDVINEETGEIFIEAGEELTEQLIQNLISNGFKAITTLAIDHIHIGPYLRNTLAADRNYSREEALLDIYRVMRPGEPPTLESAEALFSGLFFDFERFDLSAVGRVKMNARLGLETEDSIRTLRKEDIIAIVKILLELKDGRGEIDDIDNLGNRRVRPVGELLENQYRTGLSRMERAIRERMSSVEIDTVMPHDLINAKPVSGAVKEFFASSQLSQFMDQVNPLAEITHKRRLSALGPGGLTRDRAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRRVVDGVVTDEIVYLSAAEEGRYAIAQASAAMNKDGKLLEDFVSCRKGGEFTIAPPSDIQFIDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLMRAETPLVGTGMEKSVARDSGVTVVAKRDGIVDQVDATRIVVRVKETTASNPSVVDIYNLQKFQRSNQNTCINQRPLVRPGEFVKAGDIIADGPATDAGELALGRNVLVGFMSWNGSNFEDSIILSERLVREDVFTSIHIEEFEVHARDTKLGQEEITRDIPNVGDEALRHLDEAGIVSIGAEVKPGDILVGKVTPKGETPVTPEEKLLRAIFGEKASDVRDTSLRVQPGVSGTVVEVRVFSRRGVEKDERALAIERAEINRLAADRDTEKGILERAFFARLKQLLLDQKAVGAPKGAKTNVKIDEAYLEALTTGQWRQLVVDNDVIMTEIEALRKQHDEDVSVIQKRFEDKVEKVRRGDELPTGVLKTVKVFIATKRKIQAGDKMAGRHGNKGVVSVIVPEEDMPHLEDGTPVEIILNPLGVPSRMNVGQILETHLGWAAAGLGKQISQMLGEIYTNNKKPEDLKKWMASIYQKEADIKKIENMDEAEVIETAASMIRGVPMATPVFDGAHEDDIIRELQRANLNTSGQVMLIDGRTGAPFERAVTVGYIYMLKLSHMVDDKIHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVRGEDAFESGIPESFNVLVKELRSLSLNLEFGE*