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SCNpilot_expt_500_p_scaffold_683_curated_2

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(898..2256)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 450.0
  • Bit_score: 807
  • Evalue 9.50e-231
DNA repair protein radA id=3645214 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 453.0
  • Bit_score: 576
  • Evalue 3.30e-161
radA; DNA repair protein; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 453.0
  • Bit_score: 575
  • Evalue 1.80e-161

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
ATGGCAAAACCAGCTGTTATCTATGTCTGTCAACAGTGTGGTATGAATCATCCTCGTTGGACAGGTCGTTGCGCTGGTTGTGAAAGCTGGAATACTCTTATTGAGGAAGTTCAAGCTTCCTCCCCGGCTTTAAAACATCAAAAGCAGACACGCGGGAAAGTCATTGAATTTTCAAAATTAACTGAACAATCACCCGCCCTTCCGAGGGCGTTGACAGGCCTGAGTGAATTTGATCGAGTTTGTGGAGGTGGCCTCGTTCCTGGCTCTGTTATCCTTGTCGGAGGCGATCCTGGAATTGGTAAATCAACACTCCTATTACAAGTTGCAGCTCTATTAAGCAAACGTCAGGCTTGTTCTTATATTTCTGGGGAAGAAGCTGTTGAGCAAGTAAGGATGAGAGCTCACCGCTTACACCTTCAAGAATCACCATTACTATTGGCTTCAAGTACAAATGTTGGTGAGATTATTGCTTCATTAGACCATGTTAATCCCGTGCCTTTAGTCATTATTGACTCTATACAAACGATGGCAATCGATGCCATTGAATCTGCCCCTGGATCTGTTAGCCAAGTACGTGCCGCTTCTCATGAATTAACCCGCCTTGCCAAGAAGCGAGGAATCACCGTTATTATGGTTGGCCATATGACGAAAGAAGGCATGATTGCTGGCCCCAAAGTTCTCGAGCATATGGTTGATACTGTTCTTTATTTTGAAGGCGAGAGAGGTCATCAATTCCGTATCTTAAGAGCTGTAAAAAATCGCTTTGGCGCAACTGATGAAATTGGCGTTTTTGAAATGACGCAAATGGGCTTGCAGGAAGTGGCGAACCCTTCTGCCCTGTTTCTTTCAGAACGCCAAGGAGATGCGAGCGGTTCTGCTGTATTTGCTGGCATTGAAGGGACACGTCCTCTTCTTGTGGAAATTCAAGCGCTTGTTTCCCCAGCTTCCTACGGCACCCCACGTCGTGCCGTCATCGGCTGGGATGCTGGACGTCTTGCCATGATTTTAGCCGTACTTGAAGCACGCTGTGGCATTCCATTTAGTACGAAGGATGTTTATTTAAATGTTGCGGGAGGTTTAAAAATTTCTGAGCCAGCAGCCGATCTTGCTGTTGCCTCTGCTCTTATTTCTGCCTTAAATGGAAAACCTCTTCCTCATGACGCTATTTTTTTTGGAGAAATCGGTTTGTCAGGAGAACTTCGTTCCGTCGGGCAAGTCGAAATTCGCCTCAAAGAAGCTGCTAAACTTGGGTTTAAGAAGGCCTTTTTACCCCTCTTCCGACAAAAGCATACACTCAATCAAGATTTGGGTGTTCGTTTACATGAAATTGCGTTATTAAATGACTTTATTCATCTTTAA
PROTEIN sequence
Length: 453
MAKPAVIYVCQQCGMNHPRWTGRCAGCESWNTLIEEVQASSPALKHQKQTRGKVIEFSKLTEQSPALPRALTGLSEFDRVCGGGLVPGSVILVGGDPGIGKSTLLLQVAALLSKRQACSYISGEEAVEQVRMRAHRLHLQESPLLLASSTNVGEIIASLDHVNPVPLVIIDSIQTMAIDAIESAPGSVSQVRAASHELTRLAKKRGITVIMVGHMTKEGMIAGPKVLEHMVDTVLYFEGERGHQFRILRAVKNRFGATDEIGVFEMTQMGLQEVANPSALFLSERQGDASGSAVFAGIEGTRPLLVEIQALVSPASYGTPRRAVIGWDAGRLAMILAVLEARCGIPFSTKDVYLNVAGGLKISEPAADLAVASALISALNGKPLPHDAIFFGEIGLSGELRSVGQVEIRLKEAAKLGFKKAFLPLFRQKHTLNQDLGVRLHEIALLNDFIHL*