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SCNpilot_expt_500_p_scaffold_3751_curated_4

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(4255..5352)

Top 3 Functional Annotations

Value Algorithm Source
Predicted permease YjgP n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN70_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 365.0
  • Bit_score: 277
  • Evalue 1.50e-71
Uncharacterized protein {ECO:0000313|EMBL:AIL13531.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 365.0
  • Bit_score: 549
  • Evalue 4.90e-153
permease YjgP; K11720 lipopolysaccharide export system permease protein similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 365.0
  • Bit_score: 277
  • Evalue 4.70e-72

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
ATGCGTTTATTTTCTTCAATTCTTTTTCGTTATTTAGCGCGTAATTTTTTCAAATGGTTTTTCGTCGTGTCTTTTGCGGTTATGGCCATTATTATCCTTGTCGATATTTCTGAGCTTTTGCGAAAATCTGCTTCTAAGCCGGATGTAAGTTTTAAAATTTTATTTCAAATACTTGTTTTTAAGTTTCCTTCCCTTATTCAACGCGTTCTGCCATTTACAATCTTCTTTTCTTCAATTTTAACCCTTTGGAGATTGAATCGCTCTCAAGAATTAACGATCATTCGTACCTCGGGGGTTTCAATCTGGCAATCTTTAAGTCCGCTTGTCGCTGCAAGTCTTATTGTCGGAGGTATAGATTTATTTTTAGTAAATCCGATATCTTCCAAAATGATGGCTCGATATACACAGCTTGATGACTATTATTTCCATGGCAAGAAAGAAAGCTTAACAGTTTCAGAGACAGGTTTATGGATAAGGGAAATACAAAAGAACCAACATTTCATTTTTCATATTAAAAATATCAATTCGGAGAAAAACTTATTAAATGAAATTATGATTAACATCTATGATCAAAAAAATCATTTTATTGAAAGTATAAGTTCTTCTTCTGGAATCTTACATGATGGTGTCCTTTCTATGCAAAATGTTTGGAAAATTTCTCCTGAGAAATTGCCACAAAAATATGAAAGTTATAATTTTCCAACAAAAATTTCTTTTGAAACGCTTAATAATACGGGCGCCACGCCGACAATTGTTTCCTTTTGGGACTTACCAACCACAGCTCGTCTTTTAGAAGCATCTGGAATTTCTGGTCTTAAGTATATGCTGTATTGGCATTCTTTATTATCTCGTTGGGGGTGGTTAGGAGCAATGGTTGTGCTGGCAGCATCATGTTCTTTACGTCCTCTCCGCCAACAAGGGACTGTTTATTTGATTATAATTGGAGCTATTGTTGCATTTTTGTTATATTTTTTACGGGATATTACGTATACTCTAGGTCTTTCTGGTAAGCTTCCAATCGTGTTATCAGCGTGGCTTCCATTTGTTATTAGTATGATTATAGGCGTCACCCTTTTGCTTTATTCTGAGGAAGGATAA
PROTEIN sequence
Length: 366
MRLFSSILFRYLARNFFKWFFVVSFAVMAIIILVDISELLRKSASKPDVSFKILFQILVFKFPSLIQRVLPFTIFFSSILTLWRLNRSQELTIIRTSGVSIWQSLSPLVAASLIVGGIDLFLVNPISSKMMARYTQLDDYYFHGKKESLTVSETGLWIREIQKNQHFIFHIKNINSEKNLLNEIMINIYDQKNHFIESISSSSGILHDGVLSMQNVWKISPEKLPQKYESYNFPTKISFETLNNTGATPTIVSFWDLPTTARLLEASGISGLKYMLYWHSLLSRWGWLGAMVVLAASCSLRPLRQQGTVYLIIIGAIVAFLLYFLRDITYTLGLSGKLPIVLSAWLPFVISMIIGVTLLLYSEEG*