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SCNpilot_expt_500_p_scaffold_3751_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3751_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(142..798)
DNA (657bp) protein (219aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
ribulose-phosphate 3-epimerase n=1 Tax=Novispirillum itersonii RepID=UPI000367E281
SCNpilot_expt_500_p_scaffold_3751_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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844..1983
DNA (1140bp) protein (380aa)
alpha-D-QuiNAc alpha-1,3-galactosyltransferase (EC:2.4.1.-)
Alpha-D-QuiNAc alpha-1,3-galactosyltransferase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHF0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL13533.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3751_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1971..4253)
DNA (2283bp) protein (761aa)
Organic solvent tolerance protein OstA n=1 Tax=Oceanibaculum indicum P24 RepID=K2JLA2_9PROT
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ostA; organic solvent tolerance protein OstA; K04744 LPS-assembly protein
SCNpilot_expt_500_p_scaffold_3751_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4255..5352)
DNA (1098bp) protein (366aa)
Predicted permease YjgP n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN70_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:AIL13531.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
permease YjgP; K11720 lipopolysaccharide export system permease protein
SCNpilot_expt_500_p_scaffold_3751_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5354..6463)
DNA (1110bp) protein (370aa)
Permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2IZV0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13530.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
permease YjgP; K07091 lipopolysaccharide export system permease protein
SCNpilot_expt_500_p_scaffold_3751_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6620..7879
DNA (1260bp) protein (420aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
peptidyl-prolyl cis-trans isomerase family protein (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase family protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN69_RHOCS
SCNpilot_expt_500_p_scaffold_3751_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7886..8737
DNA (852bp) protein (284aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000373839D
Displaying 7 items

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