ggKbase home page

SCNpilot_expt_500_p_scaffold_339_curated_2

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 1166..1939

Top 3 Functional Annotations

Value Algorithm Source
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 243.0
  • Bit_score: 228
  • Evalue 3.00e-57
23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EYV5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 246.0
  • Bit_score: 233
  • Evalue 2.30e-58
Uncharacterized protein {ECO:0000313|EMBL:AIL13230.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 252.0
  • Bit_score: 396
  • Evalue 3.80e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGATAGAAAGACGTATGAATAAAAATCACAATTCGTCTTCAAACAAAAATACATTTTGGATTTATGGTCTTCATGCTGTAAGGACGGCATTGTTAAATGAAGAACGCCAATGTCATAAAATGATATATCTTCAAGAATCTCAGCTTAAAGAGGTTGATTCTTCAAAGAAGCCTCACCTTTCGATCGAAAAAGTAGAGCGCCAAAAGTTTGATACTTTATTCCCTGGAGGTGCTGTTCATCAAGGAATTGCACTCCTCGTGACAATTTTTGAAGAAAAAGGTAATGAAATCTTTGAACAGATGGATGATCCGTCTTGTGTTGTGATAACTCTTGATCAAATTACAGACCCCCATAATCTAGGCGCTATTTTGCGGTCAGCGGCAGCTTTTGGGGCAAAAGCCCTTATAGTGCCAGATCGCAATACACCAGATGAGAATTCTCCACTGGTTGCAAAAATAGCATCTGGGGCTTTAGAATGTGTGCCAATCATACGTGTGACCAACTTGGCACGTGCACTTGAAAAGATGAAAGATTATGGGTTCTGGCATGTTGGATTAGATGAGCAGGGAACGACCTTACTGCCAGAATTAAAGCTTACAGGAAAAACGAATATTATTTTGGGAGCTGAAGGAGAAGGTTTGCGGCGTTTAACGCAAGAAAATTGTGATTTTCTAGTGCGCTTACCGACAAATCCTTTATTCACAACATTAAACGTTTCAAATGCAGCTGCAATTAGTTTATATGAATGTGTCCGCAATAAACCAACGAGCTAG
PROTEIN sequence
Length: 258
MIERRMNKNHNSSSNKNTFWIYGLHAVRTALLNEERQCHKMIYLQESQLKEVDSSKKPHLSIEKVERQKFDTLFPGGAVHQGIALLVTIFEEKGNEIFEQMDDPSCVVITLDQITDPHNLGAILRSAAAFGAKALIVPDRNTPDENSPLVAKIASGALECVPIIRVTNLARALEKMKDYGFWHVGLDEQGTTLLPELKLTGKTNIILGAEGEGLRRLTQENCDFLVRLPTNPLFTTLNVSNAAAISLYECVRNKPTS*