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SCNpilot_expt_500_p_scaffold_339_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_339_curated_1
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..990
DNA (990bp) protein (330aa)
Aminoglycoside 3'-phosphotransferase n=1 Tax=delta proteobacterium BABL1 RepID=V6DFU6_9DELT
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:CEG57282.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
hypothetical protein; K06979
SCNpilot_expt_500_p_scaffold_339_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1166..1939
DNA (774bp) protein (258aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EYV5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13230.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_339_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1943..2569
DNA (627bp) protein (209aa)
glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15]
Glycerol-3-phosphate acyltransferase n=1 Tax=Novosphingobium sp. AP12 RepID=J3AJK5_9SPHN
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_339_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2544..3698
DNA (1155bp) protein (385aa)
DNA processing single strand binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AR18_AZOBR
DNA processing protein DprA {ECO:0000313|EMBL:AIL13228.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
dprA; DNA processing single strand binding protein
SCNpilot_expt_500_p_scaffold_339_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3740..6145
DNA (2406bp) protein (802aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase I n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1E6
SCNpilot_expt_500_p_scaffold_339_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6180..6458)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002D98F0B
Uncharacterized protein {ECO:0000313|EMBL:AIL13482.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
addiction module toxin, RelE/StbE family
SCNpilot_expt_500_p_scaffold_339_curated_7
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6466..6708)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI0003483F27
Tax=RBG_16_Gamma2_64_10_curated
SCNpilot_expt_500_p_scaffold_339_curated_8
unknown

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7090..7548
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_339_curated_9
unknown

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7815..8048
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_339_curated_10
unknown

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8148..8279
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_339_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8406..8717)
DNA (312bp) protein (104aa)
Ferredoxin, 2Fe-2S n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YL97_9PROT
Ferredoxin {ECO:0000313|EMBL:AIL13225.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
fdx4; ferredoxin, 2Fe-2S
SCNpilot_expt_500_p_scaffold_339_curated_12
unknown

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comp(8803..10446)
DNA (1644bp) protein (548aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_339_curated_13
unknown

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10598..11197
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_339_curated_14
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11313..13484
DNA (2172bp) protein (724aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
Ribonuclease R n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HWZ4_9PROT
SCNpilot_expt_500_p_scaffold_339_curated_15
unknown

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comp(13507..13791)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_339_curated_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13877..14404)
DNA (528bp) protein (176aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase id=4896214 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Liberibacter solanacearum genus=Candidatus Liberibacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_p_scaffold_339_curated_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14572..15636
DNA (1065bp) protein (355aa)
alpha/beta hydrolase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AC19
Uncharacterized protein {ECO:0000313|EMBL:AIL13220.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
patatin; K07001 NTE family protein
SCNpilot_expt_500_p_scaffold_339_curated_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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16317..16745
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=1904680 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. WH 5701 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
SCNpilot_expt_500_p_scaffold_339_curated_19
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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16745..17197
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B45C8C
Uncharacterized protein {ECO:0000313|EMBL:ETW93499.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_339_curated_20
GWF2_TM6_28_16, TM6, Bacteria

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comp(17226..18011)
DNA (786bp) protein (262aa)
Probable nicotinate-nucleotide adenylyltransferase id=4408191 bin=GWF2_TM6_28_16 species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=GWF2_TM6_28_16 organism_group=TM6
Putative nicotinate-nucleotide adenylyltransferase {ECO:0000313|EMBL:KKP24446.1}; TaxID=1619077 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_28_16.;"
SCNpilot_expt_500_p_scaffold_339_curated_21

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comp(18080..18871)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EJE7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10328.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
soluble lytic murein transglycosylase and related regulatory protein
SCNpilot_expt_500_p_scaffold_339_curated_22
unknown

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19003..19176
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_339_curated_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19283..19585
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13214.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_339_curated_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19649..21550)
DNA (1902bp) protein (634aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ftsH1; Cell division protein FtsH; ATP-dependent metalloprotease; K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5H6_AZOL4
SCNpilot_expt_500_p_scaffold_339_curated_25
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21616..22944)
DNA (1329bp) protein (443aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
ATPase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
ATPase id=3291519 bin=GWA1_Alphaproteobacteria_45_9 species=Thalassospira xiamenensis genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
SCNpilot_expt_500_p_scaffold_339_curated_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23359..24726
DNA (1368bp) protein (456aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
trigger factor n=2 Tax=Gluconacetobacter europaeus RepID=UPI00031EE51F
peptidyl-prolyl cis-trans isomerase trigger factor; K03545 trigger factor
SCNpilot_expt_500_p_scaffold_339_curated_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24763..25380
DNA (618bp) protein (206aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
protease subunit of ATP-dependent Clp protease; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YKC2_9PROT
SCNpilot_expt_500_p_scaffold_339_curated_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25489..26754
DNA (1266bp) protein (422aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z6B4_9PROT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
SCNpilot_expt_500_p_scaffold_339_curated_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26852..29275
DNA (2424bp) protein (808aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53]
peptidase n=1 Tax=Elioraea tepidiphila RepID=UPI00037A5E36
SCNpilot_expt_500_p_scaffold_339_curated_30
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(29347..31485)
DNA (2139bp) protein (713aa)
Guanosine polyphosphate pyrophosphohydrolase/synthetase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W518_MAGSA
GTP pyrophosphokinase {ECO:0000313|EMBL:AIL13207.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
guanosine polyphosphate pyrophosphohydrolase/synthetase
Displaying items 1-30 of 51 in total

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