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SCNpilot_expt_500_p_scaffold_339_curated_25

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(21616..22944)

Top 3 Functional Annotations

Value Algorithm Source
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 402.0
  • Bit_score: 273
  • Evalue 6.30e-70
ATPase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 451.0
  • Bit_score: 245
  • Evalue 3.20e-62
ATPase id=3291519 bin=GWA1_Alphaproteobacteria_45_9 species=Thalassospira xiamenensis genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 404.0
  • Bit_score: 252
  • Evalue 8.20e-64

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Taxonomy

Magnetospira sp. QH-2 → Magnetospira → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGATTTTAAGCCCCAATTTACCGCCTTCAATGCCCCTTATTACCAAGGAAGAATTTGCTCAATCCATGGCAAAATTTGGGCCTTATGAAACATCTCCTCATCTTGCAGTTGCTGTATCTGGAGGTTCAGATAGTCTTGCCTTAGCCCTTTTAGCCAACCAATGGCTAAAAACTCATGGAGGAACCTTAACTGCTTTGACTGTCGATCATCAACTTCGACCTACTTCGACTCAAGAAGCGCATCAAGTTCAAAAATGGCTTTCTGTCTATGGAATTAACACCATTATTCTTACCTGGTCAGACGCGAAATTAGAGCGTCGCCTTCAAGAAAAGGCCCGTGAAGCCCGTTACCAACGTCTTGCAGAATGGTGTCGTCTCCAAGGTGTTTTACATCTTCTCTTAGGTCATCACTTAGAAGACCAACAAGAGACGATTAGCATGCGTATGGAAAAGCATTCAGGCATAGAAGGACTTGCGGGTATGTCTGCACTTGTTGAAAAACCATACTATCGCCTTCTTCGTCCCCTTCTCACCTATTCTAAACAACGCCTCCAAGCGACTTTAATAAGCCACAACCAAACTTGGATTGAGGATCCCAGCAATCAAAATTCAAAATTTAAAAGGGTTGAATTAAGACAACAAAAGATTCAATTTTCTTCCAAGGAGATTCTTTCACGCGGACAACAAAGAATTGCTTATGAAGATACTTTAAATGTCCTAATACCTAGATTTGTGACGCCGTTTCCCGAAGGTTATGCTCTTCTTAAGCATTCAGCTTGGTCCCAACTTACGCTTGAAAATCAGCTTGGAATTATGCAAAGGCTTCTTATGACTTACGGAAGAAATCCTTACCCCCCTGCCCGAGAAAGCCTTGTAAAATTTATAGAGCATTTTCATAGTCTTTCTTCTCCACGAACGTTACACGGCTGTCTTGTGTTTCCTTACCAACAAGACTTTCTTTTAATTATGAGGGAACCTGGTGCAATTCATGATGAAATTCAGTTAACAGATAATCTTAACTCGATGCCCGCATGGTGGGATCAAAGATTCATAATTAACATCCCTGCAACTTTGCAAGGTCAGTGCACCTTAAAGGCATTAGGTCAAAAAGGATGGGAAACAATAAAAAAGGTTATTCCTGACTCTAAACAATACTTTCCCTATCCTGTTGCCTTAACACTTCCAAGCCTTTGGCAAGAGGATCGTCTAATTTCTATTCCAAATTATTTTAAGATTCCCGCAAACCAAATCTTTACACTTTTGGAAGAACACGCTATAAAGTTTTTACCACGTTATCCACTAACACGTTTTACATTCATACTTACTTAA
PROTEIN sequence
Length: 443
MILSPNLPPSMPLITKEEFAQSMAKFGPYETSPHLAVAVSGGSDSLALALLANQWLKTHGGTLTALTVDHQLRPTSTQEAHQVQKWLSVYGINTIILTWSDAKLERRLQEKAREARYQRLAEWCRLQGVLHLLLGHHLEDQQETISMRMEKHSGIEGLAGMSALVEKPYYRLLRPLLTYSKQRLQATLISHNQTWIEDPSNQNSKFKRVELRQQKIQFSSKEILSRGQQRIAYEDTLNVLIPRFVTPFPEGYALLKHSAWSQLTLENQLGIMQRLLMTYGRNPYPPARESLVKFIEHFHSLSSPRTLHGCLVFPYQQDFLLIMREPGAIHDEIQLTDNLNSMPAWWDQRFIINIPATLQGQCTLKALGQKGWETIKKVIPDSKQYFPYPVALTLPSLWQEDRLISIPNYFKIPANQIFTLLEEHAIKFLPRYPLTRFTFILT*