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SCNpilot_expt_500_p_scaffold_339_curated_14

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 11313..13484

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 718.0
  • Bit_score: 670
  • Evalue 2.90e-189
exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 709.0
  • Bit_score: 642
  • Evalue 1.40e-181
Ribonuclease R n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HWZ4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 718.0
  • Bit_score: 670
  • Evalue 2.10e-189

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Taxonomy

Caenispirillum salinarum → Caenispirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2172
TTGGCGTCTTCTTCTCAAAAATTTCCCAGTTCAGAAGATATTCTGGCATTTATCAATAGTCATGAAGGTGAAATTCGCCGCCGTGAAATTGCGCAAGCTTTTCATATTAAAGGGAGCGATCGAATTATTCTTAAGCAAATGTTGAAAGAGCTTGTGGAAAAGCAGGCGATTCAACAACGCGGAAAGTATTATCAAAGAAAAGATCGGCTTAATCTCCTTGTCGTTAAAATCATGGGAGTGGATGAAGAAGGATATCTCTTATGTTCCCCTGAAATATGGCCAGAACACGAAGAAAAACCGCTCATCCGCGTCTTTTCTAAATCAAATAAAATTAATACTTTAAATCCTGAAGATCTGGCGTTAGTTCGATTAAAGGATCAAAAATCACTTGTTGCTGAATTTGTTCGCAAGCTTGATGAAAAAACCAATCGTGTTATGGGCGTTTTTGAAATAGATGGTGAAGGAGGACGGCTTATCCTTCCTGAAAAACGTCGTAAGGTAGAATACCTTATTCCAGCAGGGCAGACCTTCAACGCGCAACAGAATGATCTTGTAGAAGCGGAATGGATCCAAGGAAGGCGCGGAGAATCTCTTAAAATCACTAAAATTTTGGGGTCTTTGAACACGCCAAAATCGATTAGTTTGATTGCGATCCATACATATGAACTTCCTCACGAATTTTCTCCCCAATCAATTGATTTGGCTGAAAAAGCAGAAGTCCCCCCTTTAGGGAGGCGAGAAGATTTGCGTAAAGTTCCTCTTGTGACAATTGATGATGAGGATGCGCGTGATTTTGATGACGCAGTGTGGGCAAGTCCTGATCCAGATCCTAAAAATCCAAATGGATGGCATCTAATCGTTGCAATAGCAGACGTATCTGCTTATGTAACGCCGAAAGATGCCTTAGATCACGAAGCGTATCGCCGGGGCAACTCAGTGTACTTCCCAGATAGGGTCGTCCCGATGTTGCCAGAAGCTTTATCCAATAACATTTGTTCACTTAAACCGCATGAAGACCGGGCTTGCCTTGCCGTTCATCTTTGGATCAATCAACAGGGACGTCTTCTGAGACATACATTTACGCGTGCATTAATGCGCTCAGCGGCAAGATTGACTTATACAAAGGCTCAGGCTGCTTTTGAAGGGCATAAGACGGATCTACCCTATGATATCATCAAACAAGTCATTCGTCCTCTCTACGGGGCTTATAAAGCACTTTGTAGCGAAAGAGATAAACGGGGTCCTTTAGATTTAGATATGCCCGAAGAACGCATTTATCTTGATGAAAAAGGGCAAGTCTCTAAAATTGCACCACGTCCGCGCTTAACAAGTCATCGCCTTATTGAAGAGTTTATGATTTTGGCCAACGTTGCTGCAGCCATTGAGCTCGAAACCCGCCAACATCTTTGTATGTATCGTGTTCATGATGAGCCTTCTCTTGAAAAAGTTGATGCCTTGCGTGAGTTCTTAAAAGGATTTGATTTAAGTCTTCCGAAAGGCCAAGCGATTCGTCCAAAAGTATTCAATTATATTCTTGAGAAAGCGAAAGAATCTCCTGCACAAGCAGCGATTCATCAACTTGTTTTGCGAGCCCAAGCCCAAGCGGTTTATAGCCCTGAAAATATTGGACATTTTGGGCTTAATTTGCCGCGATATTGCCATTTTACCTCGCCAATTCGTCGTTATGCAGATCTTATAGTCCATCGAGCCCTTGTAGAAGTGATAGAAAAACCTAAGGTGCAGGCTTTTCCGTATACTTTACCGCAGTTAAAAGCGATTGCAGAGCATATTAGCATAACAGAAAGAGTTGCAGCATCTGCAGAACGCGAAACGACAGAGCGTTATGTGGCGGCTTATCTTAAGGATAAGATTGGTGAGAACTTCATGGCGCGGATCAACGGTGTCACTGAGTTTGCAATGTTCGTGACGATTGAAGAAAATGGCGCTGATGGAATCATTCCTTTAAGATTACTCGGCGATGATTACTACATTTACGACCAGAAAAAGCAGCGTGTTGTGGGGCGTCGGAAAAAACGTATTTATACTTTAGGCGACAGACTTAAAGTGACTTTACACGAAGCTGAGCCTTTGTTAGGAGGCCTCACATTCTTACCTGTTCAGGAGAAAATTGCCGCGGACCATAAGAATACGCGTCGTAAAAACAGACGTTAG
PROTEIN sequence
Length: 724
LASSSQKFPSSEDILAFINSHEGEIRRREIAQAFHIKGSDRIILKQMLKELVEKQAIQQRGKYYQRKDRLNLLVVKIMGVDEEGYLLCSPEIWPEHEEKPLIRVFSKSNKINTLNPEDLALVRLKDQKSLVAEFVRKLDEKTNRVMGVFEIDGEGGRLILPEKRRKVEYLIPAGQTFNAQQNDLVEAEWIQGRRGESLKITKILGSLNTPKSISLIAIHTYELPHEFSPQSIDLAEKAEVPPLGRREDLRKVPLVTIDDEDARDFDDAVWASPDPDPKNPNGWHLIVAIADVSAYVTPKDALDHEAYRRGNSVYFPDRVVPMLPEALSNNICSLKPHEDRACLAVHLWINQQGRLLRHTFTRALMRSAARLTYTKAQAAFEGHKTDLPYDIIKQVIRPLYGAYKALCSERDKRGPLDLDMPEERIYLDEKGQVSKIAPRPRLTSHRLIEEFMILANVAAAIELETRQHLCMYRVHDEPSLEKVDALREFLKGFDLSLPKGQAIRPKVFNYILEKAKESPAQAAIHQLVLRAQAQAVYSPENIGHFGLNLPRYCHFTSPIRRYADLIVHRALVEVIEKPKVQAFPYTLPQLKAIAEHISITERVAASAERETTERYVAAYLKDKIGENFMARINGVTEFAMFVTIEENGADGIIPLRLLGDDYYIYDQKKQRVVGRRKKRIYTLGDRLKVTLHEAEPLLGGLTFLPVQEKIAADHKNTRRKNRR*