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SCNpilot_expt_500_p_scaffold_339_curated_31

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(31591..31965)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acantham similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 124.0
  • Bit_score: 196
  • Evalue 1.60e-47
DNA-directed RNA polymerase omega subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 125.0
  • Bit_score: 121
  • Evalue 1.50e-25
DNA-directed RNA polymerase subunit omega n=2 Tax=Micavibrio aeruginosavorus RepID=G2KT20_MICAA similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 125.0
  • Bit_score: 121
  • Evalue 4.70e-25

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGCACGCGTAACTGTTGAAGATTGTGTTCGTAAAATCTCAAATCGATTTGAATTAGTTCTCGTTGCATCCCAACGTGCGCGTCAAATTGGAGCTGGCTCTGCACTTACCGTAGAACGAGATAACGATAAGAATCCAGTCGTTGCTCTAAGAGAAATTGCAGTCAATACTGTAAAAGCAAATGATCTTAAGGATAGTTTAATCAATTCTTTTCGTATTCAAGTTGAAAATGATCCTCAAGAAGACGAGATTTCAGACTTTGTTGCACAAGAAACATTACGTTTTCAACAAGCTCCTGTATCCTCATTTGACGAAGATGATTCCGATGAAGATGAAGATTTAGAAGAAGAAAATAACGAAAATCCTTCCCTTTAG
PROTEIN sequence
Length: 125
MARVTVEDCVRKISNRFELVLVASQRARQIGAGSALTVERDNDKNPVVALREIAVNTVKANDLKDSLINSFRIQVENDPQEDEISDFVAQETLRFQQAPVSSFDEDDSDEDEDLEEENNENPSL*