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SCNpilot_expt_500_p_scaffold_743_curated_14

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 14066..14569

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 167.0
  • Bit_score: 313
  • Evalue 1.60e-82
Peptide deformylase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H5Q4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 167.0
  • Bit_score: 198
  • Evalue 5.30e-48
N-formylmethionyl-tRNA deformylase similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 169.0
  • Bit_score: 193
  • Evalue 5.40e-47

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
TTGGCTCTTTTAAAAGTCTTGAAGGTTCCTGATCCTCGCTTAAAACTCAGAGCTCATCCCGTTGAAAAAGTCGATGCAGAAGTTCAACGCATTATGGATGATATGCTCGAGACGATGTATCACGATAAAGGTTGTGGTTTAGCGGCAACTCAAGTCGGTATTCAAAAACGTATTATTGTTATTGATTTTGAGGATGAGCGTACTCCTGAACCTCTTATTATGGCGAATCCAGAAATTGTTTGGTATTCTGAGCAGCGTGAAGCTTTTACGGAAGGATGTCTTTCAGTTCCAAATCAATGGCCTTCGATCGTGCGAGCAAGCTCTGTGAAATTTCAATATCTTGACCGTCAAAACAAACAGCAAGACTTAACTGTTAACGGTATTTTGGGTGCCTGTATTCAACACGAAATAGATCATCTTAATGGGGTTCTGTTTATTGATCACCTCTCTTCTTTGAAGCGAAATCTTTTACTGCGCCGCGCAATCAAGGTAAGAGAGGATTAA
PROTEIN sequence
Length: 168
LALLKVLKVPDPRLKLRAHPVEKVDAEVQRIMDDMLETMYHDKGCGLAATQVGIQKRIIVIDFEDERTPEPLIMANPEIVWYSEQREAFTEGCLSVPNQWPSIVRASSVKFQYLDRQNKQQDLTVNGILGACIQHEIDHLNGVLFIDHLSSLKRNLLLRRAIKVRED*