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SCNpilot_expt_500_p_scaffold_743_curated_16

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 15513..16250

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 245.0
  • Bit_score: 423
  • Evalue 1.60e-115
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 245.0
  • Bit_score: 302
  • Evalue 1.20e-79
tRNA pseudouridine synthase A n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HNP8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 245.0
  • Bit_score: 308
  • Evalue 7.00e-81

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGACCCGGTACAAATTAACGGTTGAATACGACGGCACTCCTTTTGTTGGCTGGCAACATCAAGCGAATGGTATGTCAGTTCAAATGGCGCTTGAAACCGCAATTGAAGCATTTTCTCAGGAAAAAGTCCGTGTTCATGCAGCAGGTCGCACGGATGCAGGTGTTCACGCGCTTGGACAAGTGGCTCATTTCGATCTTGAAAAAATGTTTCCCGCCTATAAAGTTCGAGAAGCTTTAAATTATTATCTTCGTCCCTATCCCATAGCAATTCTTGAAGTGCAAGAAACGAATGAACAGTTTCATGCCCGTTTTTCAGCATTAGAAAGGTTCTACTGTTATAAAATTCTTTGTCGCTCTGCGCCTCCTGCCCTTGATAAAAAGAGGGTTTGGTATGTGAAACAGCCTTTAAATATAGAGATGATGCAGCAAGCTGCTAACGTTCTTATTGGAAAACACGATTTTACGACTTTTCGCGCAAGTGAATGTCAAGCAAGCTCGCCTGTACGAACATTGAATAGCTTTGAAATTACTCAAGAAAATGATTTAATTTTCTTTAAAGTTTGTGCGCTTTCCTTCCTTCATCACCAGGTTCGCAATATGGTCGGAAGTCTTAAGTTAGTCGGTGAGAACAGGTGGACACCAGAAGATTTCAAAAAGGCTTTAGAAGCAAAAAGCCGTGCCTCAGGAGGTCCCACGGCGCCACCAGAGGGTCTTTATTTTATACAGGTAAGATATTAA
PROTEIN sequence
Length: 246
MTRYKLTVEYDGTPFVGWQHQANGMSVQMALETAIEAFSQEKVRVHAAGRTDAGVHALGQVAHFDLEKMFPAYKVREALNYYLRPYPIAILEVQETNEQFHARFSALERFYCYKILCRSAPPALDKKRVWYVKQPLNIEMMQQAANVLIGKHDFTTFRASECQASSPVRTLNSFEITQENDLIFFKVCALSFLHHQVRNMVGSLKLVGENRWTPEDFKKALEAKSRASGGPTAPPEGLYFIQVRY*