ggKbase home page

SCNpilot_expt_500_p_scaffold_643_curated_25

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 24126..25910

Top 3 Functional Annotations

Value Algorithm Source
ABC-type multidrug transport system, ATPase and permease components; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 589.0
  • Bit_score: 612
  • Evalue 1.30e-172
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EX81_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 580.0
  • Bit_score: 644
  • Evalue 1.00e-181
ABC transporter permease {ECO:0000313|EMBL:AIL13541.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 594.0
  • Bit_score: 969
  • Evalue 1.90e-279

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1785
ATGAGCCATTCTTTGACCAAAAAAAAAATCTCTTTTAAAAACTCCACAACGCGTCTGCTCATTAAAAGGCTTCTTGTAAACTATGCGCGCCCTTATGTGGGACGTCTATGCATGGGTTTGGTTGCAATGATTATTGTCGCAGCAACCTCAGTCTCTTCAGCAAAGCTTATTGAACCTATTATCAATGATGTTTTTGTCGCCAAAAATGCTGATATGATATTACCCCTTACATTGGGAATTTGTTTTGTTTTTCTGTTAAAAGGTCTTGCGACTTATGCCGAATCTGTCACCATGACTTATGTAGGGCAACGCATTATTGCAGATCTTCAAAATCATCTTTTTAATCATCTTATTGAAGCAGATCTTTCTTTTTACCATGCCACTTCTAGTGGAGAGATCGTATCCCGATTTATCAACGATGTTACAAAATTACACACCGCTGTAACAGGTACCTTAACTAATATTGGCAAAGATAGCTTGATGCTTATCGGTTTCACTGCCTTTATGTTTTATCAAGATTGGTTTATGGCTTCTATTTCATTTTTTGTTGTCCCTATTGCCATTTTGCCAGTTGTAAAAATTGGAAAAAAAATGAGAAAAGCTTCTTCCAATATTCAAAAAGAAACGGCAACCTTCACTATTCTTTTAACACAAGCTTTTCAAGGCATCCGACTCGTTAAATCTTATTGTATGGAGCAATATGAGCGCCTAAAAATACATGAAACTGTTGAAGTTATCTGTCAGAAAAATTTAAAAGCTACCCGTATTCGCGCTGCTTCTCATCCTCTTATGGAATCTTTAGGTGGATTTGCAATTGCAGCCGTCGTTATTTATGGAGGTCACGCTGTTGTTAGAGGTCAACAAGATCCCGGGACTTTTTTCTCTTTTATTACAGCCCTTTTGATGATGTATGAGCCTTTAAAGCGCTTAGCAAATTTAAATGCTAATCTTCAGGATCAACTTGCCTCTGCAAGCCGTGTTTTTGAATTTCTAGATCTAAAACCACAAATTATTAATTCGGTTCAAGCAAAAGATTGCAACATTAAAAAAGGACACATCCTTTTTAATAATGTAAATTTTTCTTATAATGAGGCGTCCCAAATTCTCGATTCTTTGAGTCTTGAGATTCCAGCTGGTAAAACCGTTGCTCTCGTTGGCACGAGTGGCGCTGGAAAATCAACTATTATGAATCTTATTCCAAGGTTTTATGATGTTACTCAAGGAAATATTACAATTGATGGGATTGATGTTCGTAACATGACTCTTTCTTTTTTACGGCATAATATTGCTCTCGTTAGTCAAGAAGTCATCTTATTCGATGATACAGTTCGAAAAAATATTGAGTTTGGATGCCCTGGGGCATCCGAAGAAGAAATTGTTCAAGCTGCACAAGCAGCAGCAGCCCATGATTTTATTATGGAGCTTCCTCAAGGATATAATACACAAGTGGGCGAGCATGGTGTGCGTCTTTCAGGAGGGCAACGTCAACGTCTTTCTATTGCAAGAGCTATTCTTAAAAATGCGCCTATACTCTTACTAGATGAACCGACATCAGCTTTAGATGCAGATTCAGAACAAAAAGTAAAACAAGCTTTGAAAATACTTATGCATAAACGTACAACGCTTATTATTGCACATCGTTTAGCAACTGTTATGAATGCAGACATTATTTATGTCATTGAAAAAGGAAAGGTCATTGCATCAGGGAAACATCATGATTTGATTGCAAAAAATACACGTTATGCTCAACTTTGTAAGGCTCAATTTACCGAACCACGTCATTGA
PROTEIN sequence
Length: 595
MSHSLTKKKISFKNSTTRLLIKRLLVNYARPYVGRLCMGLVAMIIVAATSVSSAKLIEPIINDVFVAKNADMILPLTLGICFVFLLKGLATYAESVTMTYVGQRIIADLQNHLFNHLIEADLSFYHATSSGEIVSRFINDVTKLHTAVTGTLTNIGKDSLMLIGFTAFMFYQDWFMASISFFVVPIAILPVVKIGKKMRKASSNIQKETATFTILLTQAFQGIRLVKSYCMEQYERLKIHETVEVICQKNLKATRIRAASHPLMESLGGFAIAAVVIYGGHAVVRGQQDPGTFFSFITALLMMYEPLKRLANLNANLQDQLASASRVFEFLDLKPQIINSVQAKDCNIKKGHILFNNVNFSYNEASQILDSLSLEIPAGKTVALVGTSGAGKSTIMNLIPRFYDVTQGNITIDGIDVRNMTLSFLRHNIALVSQEVILFDDTVRKNIEFGCPGASEEEIVQAAQAAAAHDFIMELPQGYNTQVGEHGVRLSGGQRQRLSIARAILKNAPILLLDEPTSALDADSEQKVKQALKILMHKRTTLIIAHRLATVMNADIIYVIEKGKVIASGKHHDLIAKNTRYAQLCKAQFTEPRH*