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SCNpilot_expt_500_p_scaffold_363_curated_18

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(12893..13435)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 180.0
  • Bit_score: 336
  • Evalue 3.20e-89
aroK; shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 176.0
  • Bit_score: 175
  • Evalue 1.60e-41
Shikimate kinase n=1 Tax=uncultured bacterium RepID=K2EVH1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 173.0
  • Bit_score: 179
  • Evalue 3.60e-42

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCGCACGTCAAAACTGATTATTTTACCTAAAACTCTCACACTTGTGGGAATGATGGGCGTCGGCAAAACAAGTATAGGAAGAAAGCTTGCAAAACAATTAAGCGTACAATTCAAGGATTCAGACCAAGAAGTTGAAGTTGCAGCAGGGCAAACTGTTGCAAATATCTTCTCATGGTATGGAGAGCAAGCATTTCGTGATGCTGAACGCCGCGTCGTTTCAAGGCTACTAACAGAGCGTCCTCACGTGCTCTCAACAGGTGTTGAAGCATTTATTATGTCCGATACAAGAAAAATAATAAAAGAAAACTCTTATTCGATTTGGCTTAAAGCTTCTGTTGATACAATTTTCCCCCGTGTTGAACGTCGAACCCATCGACCACAATTAGAAAAAGGCGATAAAAAAGAAATTTTGAAGCAACTTATTGAAAGCTATAATCCAATCTATGCCGAAGCTGATATTCATATTGACTGTGATGATCAAGGTCCAGATTTAACAGTTGATAGAATCCTTGAAGAGTTGGCAGAGAGATTTTGGAAATAA
PROTEIN sequence
Length: 181
MRTSKLIILPKTLTLVGMMGVGKTSIGRKLAKQLSVQFKDSDQEVEVAAGQTVANIFSWYGEQAFRDAERRVVSRLLTERPHVLSTGVEAFIMSDTRKIIKENSYSIWLKASVDTIFPRVERRTHRPQLEKGDKKEILKQLIESYNPIYAEADIHIDCDDQGPDLTVDRILEELAERFWK*