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SCNpilot_expt_500_p_scaffold_363_curated_20

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 13689..14624

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 311.0
  • Bit_score: 459
  • Evalue 4.40e-126
Tyrosine recombinase XerD id=3710725 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 304.0
  • Bit_score: 297
  • Evalue 2.00e-77
tyrosine recombinase XerD; K04763 integrase/recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 318.0
  • Bit_score: 274
  • Evalue 4.50e-71

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
GTGAAATATCTAAGTCAATTTTTAGAAAGTTTATCTGCTGAACGCGGCTGTTCTTTAAATACGTTACAAGCATATGAAAAGGATATCCTAGATTTTGATGCTTTCTTAAAAGGAAAATGTATTAGGGATATACAAAAAATTGATATCCAAAATTATTTTTTCTATCTTAACGAACGAGCAATAGCAGCTTCTTCTCGTGCAAGAAAACTCTCTGCATTAAGGCAGTTTTTTAATTTTCTAACTCAAGAAGAGATCATTCTGAATAATCCTATTCTACTTATTGATTCACCCAAACAAGATCGTCTTCTTCCAAAAATACTTACTGAAGAAGAAGTTTTAACATTAATTGATGCAACAGAGGCACTTAGCACGCATGAAAAAGCAAGACTTTTGTGTTTGCTTGAAATTTTATATGCTACAGGAATGAGGGTTTCAGAACTCGTTAGCATTCACCTAAAAACTGCCATAATAGCTTTAAAAACAGCTCAAGAAAAAGGTACTGCTGCTTTTATAATCAAAGGAAAGGGCAATATTGAAAGATTAACTCCTTTAACGACATCAGCGTTAAATGCCTTAAACGAATATCTAAAAATTAGAAAAATATTTGAAAGTGGCATAAAAACTCAGGTCTGGCTTTTTCCCTCTCGCAGTACTGCAGGTCATTTGACCCGGCAAAGATTTGGTCAACTCTTAAAAAGTTTAGCTTTGCAAGCAGGGATCCATCCGCAAAAAGTGTCTCCTCATGTGTTAAGACATGCTTTTGCTACACATCTTCTACATCGTGGAGCTGACTTAGTTAGCGTACAAAAATTACTAGGACATGCGGACATTTCAACCACTCAAATTTATACACATGTCATCGAAACTCAAAAACAAAAGCTTGTTTTTGAGCATCACCCCTTGTCAGAATCAAAAAAAAACTCTAGGAAAGCATAA
PROTEIN sequence
Length: 312
VKYLSQFLESLSAERGCSLNTLQAYEKDILDFDAFLKGKCIRDIQKIDIQNYFFYLNERAIAASSRARKLSALRQFFNFLTQEEIILNNPILLIDSPKQDRLLPKILTEEEVLTLIDATEALSTHEKARLLCLLEILYATGMRVSELVSIHLKTAIIALKTAQEKGTAAFIIKGKGNIERLTPLTTSALNALNEYLKIRKIFESGIKTQVWLFPSRSTAGHLTRQRFGQLLKSLALQAGIHPQKVSPHVLRHAFATHLLHRGADLVSVQKLLGHADISTTQIYTHVIETQKQKLVFEHHPLSESKKNSRKA*