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SCNpilot_expt_500_p_scaffold_363_curated_22

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(15623..16228)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 167.0
  • Bit_score: 179
  • Evalue 4.30e-42
def3; Polypeptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 207.0
  • Bit_score: 155
  • Evalue 2.00e-35
Peptide deformylase 2 id=3959949 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 167.0
  • Bit_score: 179
  • Evalue 3.10e-42

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 606
ATGATACAAGAAGAAAAGAAAATGTTTCCATACGTTATTATTAATAATGAGAATTGTCAGAATCGCGATATTTTAATAAAGGCAGCAGAAGAAGTAACATTTCCTTTAACTAAAGAAGATAGAGAAATTACAGAACAATTAATTTATCAATTTAGACATGAAGAAAATTGCGCGGGTTTAGCAGCTCCACAGATTGGTTTTTCAAAACGTATTATCATATTTAGTGTTCCAGAAGAAACAAAAGAGCATAGAGTCGATGCATTTGATACAATTTCTGAAACTCTTCTTATTAACCCAACCTTTAAACCTTTAAGTGATAAAAAGAGACTTGATTGGGAAGCCTGTTTTTCAGTGAATGATTATGGTGGAGAGGTTGAAAGGTTCATACATGTATATTATGAAGGCTTTGATATAAATGGAAAAGAAATTAAAGGCGAAGCAAAAGGATTTCTCGCAAGATTAATTCAACATGAAATTGGTCATTTGAACGGACAGCTTTTTATTCATCTTCTTAAACCAAATGCGCGGCAAGGAACCCTTGAAGAAATCCGTGCCGTTCGTCGCTCTGAATTGGAAGCTATGAAAAAAGCCTCCGCACAGGAATAA
PROTEIN sequence
Length: 202
MIQEEKKMFPYVIINNENCQNRDILIKAAEEVTFPLTKEDREITEQLIYQFRHEENCAGLAAPQIGFSKRIIIFSVPEETKEHRVDAFDTISETLLINPTFKPLSDKKRLDWEACFSVNDYGGEVERFIHVYYEGFDINGKEIKGEAKGFLARLIQHEIGHLNGQLFIHLLKPNARQGTLEEIRAVRRSELEAMKKASAQE*