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SCNpilot_expt_500_p_scaffold_3749_curated_6

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(5663..6661)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 332.0
  • Bit_score: 620
  • Evalue 1.60e-174
tRNA-dihydrouridine synthase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1D4 similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 323.0
  • Bit_score: 455
  • Evalue 6.30e-125
dusB; tRNA-dihydrouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 332.0
  • Bit_score: 415
  • Evalue 1.30e-113

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
TTGACACTTCAAATAGGCCCTATCAAGCTTGATGGAAACGTAATTTTGGCACCGATAACAGGTGTTTCAGATCTTCCTTTTCGAAATCTTGTAAAAAAATTTGGCGCTTCCTTAGTAATGTCAGAAATGATTGCCTCGCAAGCGATGATTCGTGAAACGCGGCAAAGCTTAAAAATGGCGCAAAAAACAAAAGAAGAGCGCCCTATGGCTGTACAACTTGCCGGTTGTGAACCAACTGTCATGGCTGAAGCTGCACGCCTCAATGCAGATCTTGGCGCAGATCTGATTGATATTAATATGGGTTGCCCAGTGAAAAAAATTGTTAATGGACATGCAGGCTCTGCTCTTATGAGAGACGAAGTTCACGCAGCAAAGATCATCGAAGCGACAGTCAAAGCTGTTAATATTCCTGTGACATTAAAAATGCGGACGGGGTGGGATGATAATAGTCGCAATGCTCCTCGCTTAGCTAAAATTGCTGAAGAATGCGGGATTCAAATGGTCACAGTACATGGTCGCACAAGATGTCAGCTTTATAACGGACATGCAGATTGGGCTTTTATTCATCAAGTTAAAGAAGCTGTAAGAATTCCTGTTATCGGCAATGGCGATGTCAATACAGAAGAAGATGCTGCTGAACTCTTGAAACAATCAGGCGCTGATGGTGTTATGATTGCTCGAGGTTCTTTTGGAAGGCCATGGTTTTTAAATCAAGTTAGTCACTATTTGAAAACAGGTGATAAGCTACCTGCTCCGACACTTGTCGAAATGAAGCAAATTGTTTTGAACCACTATCAAGAGATTTTGGCTTACCATACCCCAGAATTAGGTGTTAAAATGGGGCGTAAGCATTTGGCATGGTATAGTAAAGGATTACCTAATTCTGCAGAATATCGTGTTAAAGTAAATCAATTACAAACCCCACAAGAAGTTATTTCCTTTATCCATTCGTTCTTTGAGACTATCATTGACAACCCTTTACAACCAATGGCAGCATAG
PROTEIN sequence
Length: 333
LTLQIGPIKLDGNVILAPITGVSDLPFRNLVKKFGASLVMSEMIASQAMIRETRQSLKMAQKTKEERPMAVQLAGCEPTVMAEAARLNADLGADLIDINMGCPVKKIVNGHAGSALMRDEVHAAKIIEATVKAVNIPVTLKMRTGWDDNSRNAPRLAKIAEECGIQMVTVHGRTRCQLYNGHADWAFIHQVKEAVRIPVIGNGDVNTEEDAAELLKQSGADGVMIARGSFGRPWFLNQVSHYLKTGDKLPAPTLVEMKQIVLNHYQEILAYHTPELGVKMGRKHLAWYSKGLPNSAEYRVKVNQLQTPQEVISFIHSFFETIIDNPLQPMAA*