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SCNpilot_expt_500_p_scaffold_3749_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3749_curated_1
unknown

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2..211
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3749_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(340..1716)
DNA (1377bp) protein (459aa)
Trk system potassium uptake protein TrkA n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HCJ0_9PROT
Potassium transporter TrkA {ECO:0000313|EMBL:AIL13152.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
trkA; potassium transporter peripheral membrane protein; K03499 trk system potassium uptake protein TrkA
SCNpilot_expt_500_p_scaffold_3749_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1740..3116)
DNA (1377bp) protein (459aa)
Nitrogen assimilation regulatory protein ntrX n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWR6_9PROT
ATPase AAA {ECO:0000313|EMBL:AIL13151.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ntrX; Nitrogen assimilation regulatory protein NtrX; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX
SCNpilot_expt_500_p_scaffold_3749_curated_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3127..5370)
DNA (2244bp) protein (748aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
two-component sensor histidine kinase Nitrogen regulation protein; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation n=1 Tax=Oceanibaculum indicum P24 RepID=K2K428_9PROT
SCNpilot_expt_500_p_scaffold_3749_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5381..5656)
DNA (276bp) protein (92aa)
Nitrogen assimilation regulatory protein NtrC n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQ42_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:AIL13150.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ntrC; Nitrogen assimilation regulatory protein NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG
SCNpilot_expt_500_p_scaffold_3749_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5663..6661)
DNA (999bp) protein (333aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
tRNA-dihydrouridine synthase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1D4
dusB; tRNA-dihydrouridine synthase B
SCNpilot_expt_500_p_scaffold_3749_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6819..7055
DNA (237bp) protein (79aa)
Putative cytosolic protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2KMC9_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_expt_500_p_scaffold_3749_curated_8
Bacillus sp. 7_6_55CFAA_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7822..8340
DNA (519bp) protein (173aa)
hypothetical protein, partial n=1 Tax=Paenibacillus fonticola RepID=UPI00035E9A5E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHL77417.1}; TaxID=665957 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus sp. 7_6_55CFAA_CT2.;"
SCNpilot_expt_500_p_scaffold_3749_curated_9
unknown

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8541..8750
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 9 items

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