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SCNpilot_expt_500_p_scaffold_4107_curated_2

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(1484..2008)

Top 3 Functional Annotations

Value Algorithm Source
conjugative transfer protein TrbC n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A9D5 similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 173.0
  • Bit_score: 94
  • Evalue 1.10e-16
Uncharacterized protein {ECO:0000313|EMBL:AIL12616.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 160.0
  • Bit_score: 198
  • Evalue 1.00e-47
trbC; conjugal transfer pilus assembly protein TrbC similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 181.0
  • Bit_score: 84
  • Evalue 2.80e-14

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
TTGTTGCCTCTTGTAAATTTTACAAATAAATTCAAATACATAATAATATATTTAAGCTTAACTATCACGGTGCAAGCGCTCTGTCAAAAAGAATATTCTTCAAGACAAACTTGTCCTGTTCAAAAGTTGAGCATAACTCAAGAAGAACACCTTCCAACTGTGTTGGTGTTTGCATCATTTTCGATGCCTGAGACGGCTCTTAAACAACTTGCAAATGATCTTAAAAAAGTGGGTGGCGCTTTAGTCATTAGGGGATTGATTAATAATAGCTTTAAAGACACCTCTCTTTACCTTCAAAAATTAGGAGAGGGAGTATTATTAGATCCCACTCTGTTTGAAAAGTTTAATATCGTTGCAGTTCCGACCTTTATCATTGTTGAAGGTGATCTTAAAAATGAGCAAACACCAAGGCACGACAAACTTCAAGGAAACGTCAGCTTAAGGTTTGTCCTTGAAAGAGCCATAAAAGAAGGAGAGATCCGAAACACCTATCTTCTTCTTGAGAAACTCCAGGGGAGTGCTTGA
PROTEIN sequence
Length: 175
LLPLVNFTNKFKYIIIYLSLTITVQALCQKEYSSRQTCPVQKLSITQEEHLPTVLVFASFSMPETALKQLANDLKKVGGALVIRGLINNSFKDTSLYLQKLGEGVLLDPTLFEKFNIVAVPTFIIVEGDLKNEQTPRHDKLQGNVSLRFVLERAIKEGEIRNTYLLLEKLQGSA*