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SCNpilot_expt_500_p_scaffold_4107_curated_5

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(3598..4098)

Top 3 Functional Annotations

Value Algorithm Source
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.4
  • Coverage: 160.0
  • Bit_score: 90
  • Evalue 2.20e-15
Type IV secretory pathway protease TraF-like protein n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DBS5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 160.0
  • Bit_score: 90
  • Evalue 1.60e-15
traF; F pilus assembly protein traF; K12062 conjugal transfer pilin signal peptidase TrbI similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 161.0
  • Bit_score: 89
  • Evalue 1.40e-15

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Taxonomy

endosymbiont of Riftia pachyptila → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGAGACTGATCTCTTCAAACAAATTAAACCTTAAGTTTTTAAGTGCAATCAATGGAATTCTCATTTTTATCCTAGTTGTTGGGTTAGGTGCCGTCATTCGCGAGAACACCACACTAACTGTTAATATGAGTGGATCGTTAGAAGGTAAATATTATTTTGTTGTTAAAAGTTATGGTCAACCTCTTGATCTTAAAACCGGTGATTATGTTGCTTTCACACATCCTTGGGTCCCAGGACTCCTTATCAAAAAAGTGAGAGGAGTTCCTGGCGATGTTGTCATCCATGTCAATGATAAGTCCTTTGTGAATGAAGAACTTATTGGCCCAATCCTCACCATGAGTCACGACAACAAAACATTAACTCCTGGGCCTCAGGTGATCATCCCTCAAGGATTTTATTTTGTGGCTGGTGACCACGCAAGAAGTTTTGACTCCAGATATGCAGAAGTAGGACTTTTAACAAAAGAGAAAATCTATGGTAAAGCTTATAAACTCTTTTAG
PROTEIN sequence
Length: 167
MRLISSNKLNLKFLSAINGILIFILVVGLGAVIRENTTLTVNMSGSLEGKYYFVVKSYGQPLDLKTGDYVAFTHPWVPGLLIKKVRGVPGDVVIHVNDKSFVNEELIGPILTMSHDNKTLTPGPQVIIPQGFYFVAGDHARSFDSRYAEVGLLTKEKIYGKAYKLF*