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SCNpilot_expt_500_p_scaffold_890_curated_2

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 2603..3580

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 313.0
  • Bit_score: 463
  • Evalue 3.20e-127
pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 316.0
  • Bit_score: 312
  • Evalue 1.50e-82
Pseudouridine synthase id=4908597 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 310.0
  • Bit_score: 335
  • Evalue 7.10e-89

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGACAGAGATAAGGAAGCATATTATTGAACCTCATGAAGTTGATCAGCGTTTAGATCGTGTTTTAGCTGGTAAATATCCTGATTTAAGCCGCACGCGAATAAAAAACCTTATTGAAGATCATAAAATTCTTATTAATGAAAAAAAGAGCCTTCCATCAGCTAAATTAAAAGAAAAGGATGTCGTTATGATTATGATTGAAGCTGCTGTTGACGCATTGCCGATTGCTCAAGATATCCCGTTGGACATTATTTATGAAGATCAAGATGTAATTGTTATTAATAAAGCTGCAGGGATGGTGGTTCATCCTGCGCCGGGGAATTACGAACAAACTCTAGTAAATGCACTTCTGGCGCATTGTGAAGGATCTCTTTCAGGGATTTCAGGCGTTAAAAGACCTGGAATTGTTCATCGCTTGGATAAAGGGACAAGCGGATTGTTAGTAGCTGCAAAGCATGATAAGGCTCATCAAGGTCTTTCAGCCCAATTTGCTAAACGCGATTTAAAACGACATTATTATGCTTTGATATGGGGCGTCCTTAATCCTCAGGAAGGATTAATTGAAGGCAATATTGGTCGCAGTCCTCATAATCGTCAGAAAATGGCTTTATTAAAACATGGCGGGAAGGAAGCACGCACGCACTATAAAACAATTAAAATATTCGGTCGAATCGCAAGCCTTCTTGAATGCCAATTAGAGACAGGAAGAACACATCAAATTCGTGTCCATTTAGCCTCACAAGGACATGGTATTATTTGTGATCCTCAGTACGGACGCACCCCGAAAGGATTAATGAATATCATTAAGGCGCTTTATGATATAAATGGCGAGAGTACGAGACCTTTTTTACACGCTTATTGTCTCAATTTTATTCATCCTGTTACCCAACAAGAAATGAAATTTAAATGCGAAATGCCCAAAGATTTTAGGGATGCTGTTGACATTTTACTTAAAACTTCAGCAACTGATGTGCAATAA
PROTEIN sequence
Length: 326
MTEIRKHIIEPHEVDQRLDRVLAGKYPDLSRTRIKNLIEDHKILINEKKSLPSAKLKEKDVVMIMIEAAVDALPIAQDIPLDIIYEDQDVIVINKAAGMVVHPAPGNYEQTLVNALLAHCEGSLSGISGVKRPGIVHRLDKGTSGLLVAAKHDKAHQGLSAQFAKRDLKRHYYALIWGVLNPQEGLIEGNIGRSPHNRQKMALLKHGGKEARTHYKTIKIFGRIASLLECQLETGRTHQIRVHLASQGHGIICDPQYGRTPKGLMNIIKALYDINGESTRPFLHAYCLNFIHPVTQQEMKFKCEMPKDFRDAVDILLKTSATDVQ*