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SCNpilot_expt_500_p_scaffold_890_curated_3

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 3768..4703

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000373EEDD similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 286.0
  • Bit_score: 318
  • Evalue 8.60e-84
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 290.0
  • Bit_score: 480
  • Evalue 2.40e-132
rpoH3; RNA polymerase sigma factor (sigma32) similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 286.0
  • Bit_score: 312
  • Evalue 1.50e-82

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
GTGTCTACATTAAATCAAAATAAATCTAAAAGTTCTCATAATTTTCGCCATCTGATACCTAATATGGCTGATGAAAACAGTCTCTCTCATTTTGTACTTCTTGCTAAAAAATTTCCCATGTTAGAAGCTGATGAAGAATTCAAACTTGCCAAATGTTGGCATGAAGAACAACACGAAGAATCAGCCCATGCCCTATTGCAAAGTCATTTGCGGTTAGTAGCGAAAATGGCTTCGGGCTATCGTGGATATGGTCTTCCTTTGCATGATTTGCTGGCAGAAGGCAATATTGGAATGATGCATGCTTTAAGAAAGTTTGACCCTGGGAAAGGATTCCGATTTTCGACCTACGCTATGTGGTGGATTGACGCTACAATCAAAGAATATATTCTAAAATCTTGGTCCCTCGTAAAAATGGGAACTACGGCAAGCCAAAAAAAACTTTTCTTCGGACTAAGAGCATTAAAGTCTAAGCTAAGAGATCAACATGGTGACCTTAGTCATGAAGGGAACCTTTCTGAAGAACTAGTTCAAGAAATCTCAAAGAAATTGAATGTAAGTCGAGAAGACGTTCTTATGATGAATGAAAGAATGCAAGGTCAAGAATTTTCATTAAATTCTATTGTCAGTGAAGAAATCGGAGGAGAATGGCAAGACTGGCTTTTAGACGAAAGTGAGAATCAAGAAGTTACCTTAGCACATCAACAAGAATACGAAAAACGTCACTCTCTTTTACAAGAAGCTTTTCAAGTTCTTGCAAAACGTGAATATGATGTGTTTATTGCACGTAGACTTGAAGAACCACCGAAAACGCTTGAAGAACTTTCAGAGATATATCAAATATCCCGTGAAAGAGTTCGCCAGATTGAGATGAAAGCTTTTGAAAAAATTCAAAATGAAGTTCATAAATCAGCAGAAAAGATAGGTATTTTAAACTAA
PROTEIN sequence
Length: 312
VSTLNQNKSKSSHNFRHLIPNMADENSLSHFVLLAKKFPMLEADEEFKLAKCWHEEQHEESAHALLQSHLRLVAKMASGYRGYGLPLHDLLAEGNIGMMHALRKFDPGKGFRFSTYAMWWIDATIKEYILKSWSLVKMGTTASQKKLFFGLRALKSKLRDQHGDLSHEGNLSEELVQEISKKLNVSREDVLMMNERMQGQEFSLNSIVSEEIGGEWQDWLLDESENQEVTLAHQQEYEKRHSLLQEAFQVLAKREYDVFIARRLEEPPKTLEELSEIYQISRERVRQIEMKAFEKIQNEVHKSAEKIGILN*