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SCNpilot_expt_500_p_scaffold_8755_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_8755_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..625)
DNA (624bp) protein (208aa)
conjugal transfer protein TraU n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACE7
conjugal transfer protein TraU n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACE7
Conjugal transfer protein {ECO:0000313|EMBL:AIL13432.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Conjugal transfer protein {ECO:0000313|EMBL:AIL13432.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_8755_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(629..895)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13431.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13431.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_8755_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(892..1206)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13430.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13430.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_8755_curated_4

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comp(1199..1834)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACE5
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACE5
Uncharacterized protein {ECO:0000313|EMBL:EKE08833.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein {ECO:0000313|EMBL:EKE08833.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_p_scaffold_8755_curated_5
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1809..2309)
DNA (501bp) protein (167aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
Type IV secretory pathway protease TraF-like protein n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DBS5_9GAMM
Type IV secretory pathway protease TraF-like protein n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DBS5_9GAMM
SCNpilot_expt_500_p_scaffold_8755_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2306..2647)
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12620.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL12620.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_8755_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2644..5142)
DNA (2499bp) protein (833aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12621.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL12621.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative inner-membrane protein traC id=4756796 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative inner-membrane protein traC id=4756796 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_p_scaffold_8755_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5142..5471)
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12622.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL12622.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_8755_curated_9

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comp(5468..6739)
DNA (1272bp) protein (424aa)
putative conjugative transfer protein TraB n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACDF
putative conjugative transfer protein TraB n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACDF
TraB pilus assembly {ECO:0000313|EMBL:EKE08829.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TraB pilus assembly {ECO:0000313|EMBL:EKE08829.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_p_scaffold_8755_curated_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6736..7272)
DNA (537bp) protein (179aa)
IncF plasmid conjugative transfer pilus assembly protein TraK n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DBT1_9GAMM
IncF plasmid conjugative transfer pilus assembly protein TraK n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DBT1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIL13426.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13426.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Displaying 10 items

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