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SCNpilot_expt_500_p_scaffold_3548_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3548_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1036
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Rhodotorula glutinis (strain ATCC 204091 / IIP 30 / MTCC 1151) RepID=G0T0Y0_RHOG2
Putative uncharacterized protein n=1 Tax=Rhodotorula glutinis (strain ATCC 204091 / IIP 30 / MTCC 1151) RepID=G0T0Y0_RHOG2
Uncharacterized protein {ECO:0000313|EMBL:AIL13260.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13260.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3548_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1466..2866
DNA (1401bp) protein (467aa)
GA28568 n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=B5DRQ7_DROPS
GA28568 n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=B5DRQ7_DROPS
Uncharacterized protein {ECO:0000313|EMBL:AIL13127.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13127.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3548_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2969..3232)
DNA (264bp) protein (88aa)
USG protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B56E43
USG protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B56E43
Uncharacterized protein {ECO:0000313|EMBL:AIL13263.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13263.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3548_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3300..3653)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida CSV86 RepID=L1M5Q8_PSEPU
Uncharacterized protein n=1 Tax=Pseudomonas putida CSV86 RepID=L1M5Q8_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:AIL13264.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13264.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3548_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3662..4429)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EJI2_9BACT
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EJI2_9BACT
Cytochrome C {ECO:0000313|EMBL:AIL13265.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Cytochrome C {ECO:0000313|EMBL:AIL13265.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3548_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4426..5667)
DNA (1242bp) protein (414aa)
Cytochrome b n=1 Tax=Oceanibaculum indicum P24 RepID=K2JH31_9PROT
Cytochrome b n=1 Tax=Oceanibaculum indicum P24 RepID=K2JH31_9PROT
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3548_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5676..6242)
DNA (567bp) protein (189aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP22_AZOBR
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP22_AZOBR
SCNpilot_expt_500_p_scaffold_3548_curated_8

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comp(6532..7446)
DNA (915bp) protein (305aa)
Redox-sensitive transcriptional activator id=3924194 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Redox-sensitive transcriptional activator id=3924194 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Redox-sensitive transcriptional activator {ECO:0000313|EMBL:EKE09011.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Redox-sensitive transcriptional activator {ECO:0000313|EMBL:EKE09011.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_p_scaffold_3548_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7958..9064
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B930
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B930
Uncharacterized protein {ECO:0000313|EMBL:AIL13268.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13268.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3548_curated_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9086..9535)
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12860.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL12860.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3548_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9635..10207)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BFBD
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BFBD
Uncharacterized protein {ECO:0000313|EMBL:AIL13918.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13918.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_3548_curated_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10228..11379)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BFBE
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BFBE
Uncharacterized protein {ECO:0000313|EMBL:AIL13355.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13355.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Displaying 12 items

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