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SCNpilot_expt_500_p_scaffold_1147_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1147_curated_1
unknown

Not on your lists

3..110
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1147_curated_2
unknown

Not on your lists

82..171
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1147_curated_3
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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179..922
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) RepID=Q5ZWW2_LEGPH
Putative uncharacterized protein n=1 Tax=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) RepID=Q5ZWW2_LEGPH
hypothetical protein
hypothetical protein
SCNpilot_expt_500_p_scaffold_1147_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1286..1885)
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13733.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13733.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1147_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1895..2143)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13732.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13732.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1147_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2231..3487)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XEL3_METSD
Uncharacterized protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XEL3_METSD
Uncharacterized protein {ECO:0000313|EMBL:AIL13731.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13731.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1147_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4146..4628)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AF50
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AF50
Uncharacterized protein {ECO:0000313|EMBL:AIL13913.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13913.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1147_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4645..5607)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AF51
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AF51
Uncharacterized protein {ECO:0000313|EMBL:AIL13914.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL13914.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1147_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5976..6422
DNA (447bp) protein (149aa)
Single-stranded DNA-binding protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXS8_PHAMO
Single-stranded DNA-binding protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXS8_PHAMO
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1147_curated_10
unknown

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comp(6681..6776)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1147_curated_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7217..7798
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W6U1_MAGSA
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W6U1_MAGSA
hypothetical protein
hypothetical protein
SCNpilot_expt_500_p_scaffold_1147_curated_12

Not on your lists

7826..8695
DNA (870bp) protein (290aa)
Conserved domain protein (Fragment) n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W397_9FIRM
Conserved domain protein (Fragment) n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W397_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKM19150.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein {ECO:0000313|EMBL:KKM19150.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_500_p_scaffold_1147_curated_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8961..13043)
DNA (4083bp) protein (1361aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12848.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIL12848.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1147_curated_14
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13340..21325
DNA (7986bp) protein (2662aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Hafnia alvei ATCC 51873 RepID=G9Y7Z3_HAFAL
Outer membrane autotransporter barrel domain protein n=1 Tax=Hafnia alvei ATCC 51873 RepID=G9Y7Z3_HAFAL
Uncharacterized protein {ECO:0000313|EMBL:KDF04682.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Uncharacterized protein {ECO:0000313|EMBL:KDF04682.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
SCNpilot_expt_500_p_scaffold_1147_curated_15
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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21459..22076
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CEG0_9PLAN
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CEG0_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL56915.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Uncharacterized protein {ECO:0000313|EMBL:EDL56915.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
SCNpilot_expt_500_p_scaffold_1147_curated_16
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

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22143..24710
DNA (2568bp) protein (856aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGL7_9CLOT
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGL7_9CLOT
hypothetical protein
hypothetical protein
SCNpilot_expt_500_p_scaffold_1147_curated_17
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(24917..25423)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002E6ABB7
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002E6ABB7
N-acetyltransferase GCN5
N-acetyltransferase GCN5
SCNpilot_expt_500_p_scaffold_1147_curated_18
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(25420..25701)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002FD628C
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002FD628C
Toxin-antitoxin system protein {ECO:0000313|EMBL:EKF01292.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
Toxin-antitoxin system protein {ECO:0000313|EMBL:EKF01292.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
SCNpilot_expt_500_p_scaffold_1147_curated_19
unknown

Not on your lists

25874..26296
DNA (423bp) protein (141aa)

This feature has no annotations

Displaying 19 items

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